Correct JavaDoc from doxygen comments indentation

Adds missing JavaDoc indentation for doxygen comments obtained from:
- enum values
- class methods
- constructors
- global functions/variables
diff --git a/Source/Doxygen/doxytranslator.cxx b/Source/Doxygen/doxytranslator.cxx
index 2684adc..fb21de7 100644
--- a/Source/Doxygen/doxytranslator.cxx
+++ b/Source/Doxygen/doxytranslator.cxx
@@ -31,14 +31,33 @@
   return Getattr(node, "doxygen");
 }
 
+/**
+ * Indent all lines in the comment by given indentation string
+ */
+void DoxygenTranslator::extraIndentation(String *comment, const_String_or_char_ptr indentationString) {
+  if (indentationString || Len(indentationString) > 0) {
+    int len = Len(comment);
+    bool trailing_newline = len > 0 && *(Char(comment) + len - 1) == '\n';
+    Insert(comment, 0, indentationString);
+    String *replace = NewStringf("\n%s", indentationString);
+    Replaceall(comment, "\n", replace);
+    if (trailing_newline) {
+      len = Len(comment);
+      Delslice(comment, len - 2, len); // Remove added trailing spaces on last line
+    }
+    Delete(replace);
+  }
+}
 
-String *DoxygenTranslator::getDocumentation(Node *node) {
+String *DoxygenTranslator::getDocumentation(Node *node, const_String_or_char_ptr indentationString) {
 
   if (!hasDocumentation(node)) {
     return NewString("");
   }
 
-  return makeDocumentation(node);
+  String *documentation = makeDocumentation(node);
+  extraIndentation(documentation, indentationString);
+  return documentation;
 }
 
 
diff --git a/Source/Doxygen/doxytranslator.h b/Source/Doxygen/doxytranslator.h
index ffc378a..f07b632 100644
--- a/Source/Doxygen/doxytranslator.h
+++ b/Source/Doxygen/doxytranslator.h
@@ -56,7 +56,7 @@
    * Return the documentation for a given node formated for the correct 
    * documentation system.
    */
-  String *getDocumentation(Node *node);
+  String *getDocumentation(Node *node, const_String_or_char_ptr indentationString);
 
   /*
    * Returns truem is the specified node has comment attached.
@@ -84,6 +84,7 @@
    */
   void printTree(const DoxygenEntityList &entityList);
 
+  void extraIndentation(String *comment, const_String_or_char_ptr indentationString);
 };
 
 #endif
diff --git a/Source/Doxygen/javadoc.cxx b/Source/Doxygen/javadoc.cxx
index 18eaeb4..628f5a6 100644
--- a/Source/Doxygen/javadoc.cxx
+++ b/Source/Doxygen/javadoc.cxx
@@ -795,9 +795,7 @@
 
     string translatedStr = indentAndInsertAsterisks(doc);
 
-    String *comment = NewString(translatedStr.c_str());
-    // Append(comment, documentation); Replaceall(comment, "\n", "\n * ");
-    return comment;
+    return NewString(translatedStr.c_str());
   }
 
   DoxygenEntityList entityList = parser.createTree(node, documentation);
diff --git a/Source/Modules/java.cxx b/Source/Modules/java.cxx
index 69abf6a..195ad5a 100644
--- a/Source/Modules/java.cxx
+++ b/Source/Modules/java.cxx
@@ -592,9 +592,9 @@
 	Printf(f_module, "%s\n", module_imports);
 
       if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-	String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+	String *doxygen_comments = doxygenTranslator->getDocumentation(n, 0);
 	if (comment_creation_chatter)
-	  Printf(f_module, "/* This was generated from top() */");
+	  Printf(f_module, "/* This was generated from top() */\n");
 	Printv(f_module, Char(doxygen_comments), NIL);
 	Delete(doxygen_comments);
       }
@@ -1275,10 +1275,9 @@
       String *typemap_lookup_type = Getattr(n, "name");
 
       if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-        String *doxygen_comments = doxygenTranslator->getDocumentation(n);
-        if (comment_creation_chatter) {
-          Printf(enum_code, "/* This was generated from enumDeclaration() */");
-        }
+        String *doxygen_comments = doxygenTranslator->getDocumentation(n, 0);
+        if (comment_creation_chatter)
+          Printf(enum_code, "/* This was generated from enumDeclaration() */\n");
         Printv(enum_code, Char(doxygen_comments), NIL);
         Delete(doxygen_comments);
       }
@@ -1307,9 +1306,9 @@
       } else {
 	// Translate and write javadoc comment for the enum itself if flagged
 	if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-	  String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+	  String *doxygen_comments = doxygenTranslator->getDocumentation(n, 0);
 	  if (comment_creation_chatter)
-	    Printf(constants_code, "/* This was generated from enumDeclaration() */");
+	    Printf(constants_code, "/* This was generated from enumDeclaration() */\n");
 	  Printf(constants_code, "/* Comment for enum %s */\n", Getattr(n, "unnamedinstance") ? "" : symname);
 	  Printf(constants_code, Char(doxygen_comments));
 	  Printf(constants_code, "\n");
@@ -1474,9 +1473,9 @@
 
       // Translate and write javadoc comment if flagged
       if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-	String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+	String *doxygen_comments = doxygenTranslator->getDocumentation(n, "  ");
 	if (comment_creation_chatter)
-	  Printf(enum_code, "/* This was generated from enumvalueDeclaration() */");
+	  Printf(enum_code, "/* This was generated from enumvalueDeclaration() */\n");
 	Printv(enum_code, Char(doxygen_comments), NIL);
 	Delete(doxygen_comments);
       }
@@ -1559,9 +1558,9 @@
 
     // Translate and write javadoc comment if flagged
     if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-      String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+      String *doxygen_comments = doxygenTranslator->getDocumentation(n, 0);
       if (comment_creation_chatter)
-	Printf(constants_code, "/* This was generated from constantWrapper() */");
+	Printf(constants_code, "/* This was generated from constantWrapper() */\n");
       Printv(constants_code, Char(doxygen_comments), NIL);
       Delete(doxygen_comments);
     }
@@ -2008,9 +2007,9 @@
 
     // Translate and write javadoc comment if flagged
     if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-      String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+      String *doxygen_comments = doxygenTranslator->getDocumentation(n, 0);
       if (comment_creation_chatter)
-	Printf(proxy_class_def, "/* This was generated from emitProxyClassDefAndCPPCasts() */");
+	Printf(proxy_class_def, "/* This was generated from emitProxyClassDefAndCPPCasts() */\n");
       Printv(proxy_class_def, Char(doxygen_comments), NIL);
       Delete(doxygen_comments);
     }
@@ -2505,9 +2504,9 @@
 
     // Translate and write javadoc comment if flagged
     if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-      String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+      String *doxygen_comments = doxygenTranslator->getDocumentation(n, "  ");
       if (comment_creation_chatter)
-	Printf(function_code, "/* This was generated from proxyclassfunctionhandler() */");
+	Printf(function_code, "/* This was generated from proxyclassfunctionhandler() */\n");
       Printv(function_code, Char(doxygen_comments), NIL);
       Delete(doxygen_comments);
     }
@@ -2747,11 +2746,11 @@
       tm = Getattr(n, "tmap:jtype"); // typemaps were attached earlier to the node
       Printf(im_return_type, "%s", tm);
 
-    // Translate and write javadoc comment if flagged
-    if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-      String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+      // Translate and write javadoc comment if flagged
+      if (doxygen && doxygenTranslator->hasDocumentation(n)) {
+	String *doxygen_comments = doxygenTranslator->getDocumentation(n, "  ");
 	if (comment_creation_chatter)
-	  Printf(function_code, "/* This was generated from constructionhandler() */");
+	  Printf(function_code, "/* This was generated from constructionhandler() */\n");
 	Printv(function_code, Char(doxygen_comments), NIL);
 	Delete(doxygen_comments);
       }
@@ -3023,9 +3022,9 @@
 
     // Translate and write javadoc comment if flagged
     if (doxygen && doxygenTranslator->hasDocumentation(n)) {
-      String *doxygen_comments = doxygenTranslator->getDocumentation(n);
+      String *doxygen_comments = doxygenTranslator->getDocumentation(n, "  ");
       if (comment_creation_chatter)
-	Printf(function_code, "/* This was generated from moduleClassFunctionHandler() */");
+	Printf(function_code, "/* This was generated from moduleClassFunctionHandler() */\n");
       Printv(function_code, doxygen_comments, NIL);
       Delete(doxygen_comments);
     }
diff --git a/Source/Modules/python.cxx b/Source/Modules/python.cxx
index f5770a9..bdbb4e9 100755
--- a/Source/Modules/python.cxx
+++ b/Source/Modules/python.cxx
@@ -1678,7 +1678,7 @@
       if (doxygen) {
 	docstr = Getattr(n, "python:docstring");
 	if (!docstr && doxygenTranslator->hasDocumentation(n)) {
-	  docstr = doxygenTranslator->getDocumentation(n);
+	  docstr = doxygenTranslator->getDocumentation(n, 0);
 
 	  // Avoid rebuilding it again the next time: notice that we can't do
 	  // this for the combined doc string as autodoc part of it depends on