blob: 3b9ae69199271e618b08479c0988929c838cb4f3 [file] [log] [blame]
#![cfg(feature = "quickcheck")]
#[macro_use]
extern crate quickcheck;
extern crate petgraph;
extern crate rand;
#[macro_use]
extern crate defmac;
extern crate itertools;
extern crate odds;
mod utils;
use utils::{Small, Tournament};
use odds::prelude::*;
use std::collections::HashSet;
use std::hash::Hash;
use itertools::assert_equal;
use itertools::cloned;
use quickcheck::{Arbitrary, Gen};
use rand::Rng;
use petgraph::algo::{
bellman_ford, condensation, dijkstra, find_negative_cycle, floyd_warshall, ford_fulkerson,
greedy_feedback_arc_set, greedy_matching, is_cyclic_directed, is_cyclic_undirected,
is_isomorphic, is_isomorphic_matching, k_shortest_path, kosaraju_scc, maximum_matching,
min_spanning_tree, page_rank, tarjan_scc, toposort, Matching,
};
use petgraph::data::FromElements;
use petgraph::dot::{Config, Dot};
use petgraph::graph::{edge_index, node_index, IndexType};
use petgraph::graphmap::NodeTrait;
use petgraph::operator::complement;
use petgraph::prelude::*;
use petgraph::visit::{
EdgeFiltered, EdgeIndexable, IntoEdgeReferences, IntoEdges, IntoNeighbors, IntoNodeIdentifiers,
IntoNodeReferences, NodeCount, NodeIndexable, Reversed, Topo, VisitMap, Visitable,
};
use petgraph::EdgeType;
fn mst_graph<N, E, Ty, Ix>(g: &Graph<N, E, Ty, Ix>) -> Graph<N, E, Undirected, Ix>
where
Ty: EdgeType,
Ix: IndexType,
N: Clone,
E: Clone + PartialOrd,
{
Graph::from_elements(min_spanning_tree(&g))
}
use std::fmt;
quickcheck! {
fn mst_directed(g: Small<Graph<(), u32>>) -> bool {
// filter out isolated nodes
let no_singles = g.filter_map(
|nx, w| g.neighbors_undirected(nx).next().map(|_| w),
|_, w| Some(w));
for i in no_singles.node_indices() {
assert!(no_singles.neighbors_undirected(i).count() > 0);
}
assert_eq!(no_singles.edge_count(), g.edge_count());
let mst = mst_graph(&no_singles);
assert!(!is_cyclic_undirected(&mst));
true
}
}
quickcheck! {
fn mst_undirected(g: Graph<(), u32, Undirected>) -> bool {
// filter out isolated nodes
let no_singles = g.filter_map(
|nx, w| g.neighbors_undirected(nx).next().map(|_| w),
|_, w| Some(w));
for i in no_singles.node_indices() {
assert!(no_singles.neighbors_undirected(i).count() > 0);
}
assert_eq!(no_singles.edge_count(), g.edge_count());
let mst = mst_graph(&no_singles);
assert!(!is_cyclic_undirected(&mst));
true
}
}
quickcheck! {
fn reverse_undirected(g: Small<UnGraph<(), ()>>) -> bool {
let mut h = (*g).clone();
h.reverse();
is_isomorphic(&*g, &h)
}
}
fn assert_graph_consistent<N, E, Ty, Ix>(g: &Graph<N, E, Ty, Ix>)
where
Ty: EdgeType,
Ix: IndexType,
{
assert_eq!(g.node_count(), g.node_indices().count());
assert_eq!(g.edge_count(), g.edge_indices().count());
for edge in g.raw_edges() {
assert!(
g.find_edge(edge.source(), edge.target()).is_some(),
"Edge not in graph! {:?} to {:?}",
edge.source(),
edge.target()
);
}
}
#[test]
fn reverse_directed() {
fn prop<Ty: EdgeType>(mut g: Graph<(), (), Ty>) -> bool {
let node_outdegrees = g
.node_indices()
.map(|i| g.neighbors_directed(i, Outgoing).count())
.collect::<Vec<_>>();
let node_indegrees = g
.node_indices()
.map(|i| g.neighbors_directed(i, Incoming).count())
.collect::<Vec<_>>();
g.reverse();
let new_outdegrees = g
.node_indices()
.map(|i| g.neighbors_directed(i, Outgoing).count())
.collect::<Vec<_>>();
let new_indegrees = g
.node_indices()
.map(|i| g.neighbors_directed(i, Incoming).count())
.collect::<Vec<_>>();
assert_eq!(node_outdegrees, new_indegrees);
assert_eq!(node_indegrees, new_outdegrees);
assert_graph_consistent(&g);
true
}
quickcheck::quickcheck(prop as fn(Graph<_, _, Directed>) -> bool);
}
#[test]
fn graph_retain_nodes() {
fn prop<Ty: EdgeType>(mut g: Graph<i32, i32, Ty>) -> bool {
// Remove all negative nodes, these should be randomly spread
let og = g.clone();
let nodes = g.node_count();
let num_negs = g.raw_nodes().iter().filter(|n| n.weight < 0).count();
let mut removed = 0;
g.retain_nodes(|g, i| {
let keep = g[i] >= 0;
if !keep {
removed += 1;
}
keep
});
let num_negs_post = g.raw_nodes().iter().filter(|n| n.weight < 0).count();
let num_pos_post = g.raw_nodes().iter().filter(|n| n.weight >= 0).count();
assert_eq!(num_negs_post, 0);
assert_eq!(removed, num_negs);
assert_eq!(num_negs + g.node_count(), nodes);
assert_eq!(num_pos_post, g.node_count());
// check against filter_map
let filtered = og.filter_map(
|_, w| if *w >= 0 { Some(*w) } else { None },
|_, w| Some(*w),
);
assert_eq!(g.node_count(), filtered.node_count());
/*
println!("Iso of graph with nodes={}, edges={}",
g.node_count(), g.edge_count());
*/
assert!(is_isomorphic_matching(
&filtered,
&g,
PartialEq::eq,
PartialEq::eq
));
true
}
quickcheck::quickcheck(prop as fn(Graph<_, _, Directed>) -> bool);
quickcheck::quickcheck(prop as fn(Graph<_, _, Undirected>) -> bool);
}
#[test]
fn graph_retain_edges() {
fn prop<Ty: EdgeType>(mut g: Graph<(), i32, Ty>) -> bool {
// Remove all negative edges, these should be randomly spread
let og = g.clone();
let edges = g.edge_count();
let num_negs = g.raw_edges().iter().filter(|n| n.weight < 0).count();
let mut removed = 0;
g.retain_edges(|g, i| {
let keep = g[i] >= 0;
if !keep {
removed += 1;
}
keep
});
let num_negs_post = g.raw_edges().iter().filter(|n| n.weight < 0).count();
let num_pos_post = g.raw_edges().iter().filter(|n| n.weight >= 0).count();
assert_eq!(num_negs_post, 0);
assert_eq!(removed, num_negs);
assert_eq!(num_negs + g.edge_count(), edges);
assert_eq!(num_pos_post, g.edge_count());
if og.edge_count() < 30 {
// check against filter_map
let filtered = og.filter_map(
|_, w| Some(*w),
|_, w| if *w >= 0 { Some(*w) } else { None },
);
assert_eq!(g.node_count(), filtered.node_count());
assert!(is_isomorphic(&filtered, &g));
}
true
}
quickcheck::quickcheck(prop as fn(Graph<_, _, Directed>) -> bool);
quickcheck::quickcheck(prop as fn(Graph<_, _, Undirected>) -> bool);
}
#[test]
fn stable_graph_retain_edges() {
fn prop<Ty: EdgeType>(mut g: StableGraph<(), i32, Ty>) -> bool {
// Remove all negative edges, these should be randomly spread
let og = g.clone();
let edges = g.edge_count();
let num_negs = g.edge_references().filter(|n| *n.weight() < 0).count();
let mut removed = 0;
g.retain_edges(|g, i| {
let keep = g[i] >= 0;
if !keep {
removed += 1;
}
keep
});
let num_negs_post = g.edge_references().filter(|n| *n.weight() < 0).count();
let num_pos_post = g.edge_references().filter(|n| *n.weight() >= 0).count();
assert_eq!(num_negs_post, 0);
assert_eq!(removed, num_negs);
assert_eq!(num_negs + g.edge_count(), edges);
assert_eq!(num_pos_post, g.edge_count());
if og.edge_count() < 30 {
// check against filter_map
let filtered = og.filter_map(
|_, w| Some(*w),
|_, w| if *w >= 0 { Some(*w) } else { None },
);
assert_eq!(g.node_count(), filtered.node_count());
}
true
}
quickcheck::quickcheck(prop as fn(StableGraph<_, _, Directed>) -> bool);
quickcheck::quickcheck(prop as fn(StableGraph<_, _, Undirected>) -> bool);
}
#[test]
fn isomorphism_1() {
// using small weights so that duplicates are likely
fn prop<Ty: EdgeType>(g: Small<Graph<i8, i8, Ty>>) -> bool {
let mut rng = rand::thread_rng();
// several trials of different isomorphisms of the same graph
// mapping of node indices
let mut map = g.node_indices().collect::<Vec<_>>();
let mut ng = Graph::<_, _, Ty>::with_capacity(g.node_count(), g.edge_count());
for _ in 0..1 {
rng.shuffle(&mut map);
ng.clear();
for _ in g.node_indices() {
ng.add_node(0);
}
// Assign node weights
for i in g.node_indices() {
ng[map[i.index()]] = g[i];
}
// Add edges
for i in g.edge_indices() {
let (s, t) = g.edge_endpoints(i).unwrap();
ng.add_edge(map[s.index()], map[t.index()], g[i]);
}
if g.node_count() < 20 && g.edge_count() < 50 {
assert!(is_isomorphic(&*g, &ng));
}
assert!(is_isomorphic_matching(
&*g,
&ng,
PartialEq::eq,
PartialEq::eq
));
}
true
}
quickcheck::quickcheck(prop::<Undirected> as fn(_) -> bool);
quickcheck::quickcheck(prop::<Directed> as fn(_) -> bool);
}
#[test]
fn isomorphism_modify() {
// using small weights so that duplicates are likely
fn prop<Ty: EdgeType>(g: Small<Graph<i16, i8, Ty>>, node: u8, edge: u8) -> bool {
println!("graph {:#?}", g);
let mut ng = (*g).clone();
let i = node_index(node as usize);
let j = edge_index(edge as usize);
if i.index() < g.node_count() {
ng[i] = (g[i] == 0) as i16;
}
if j.index() < g.edge_count() {
ng[j] = (g[j] == 0) as i8;
}
if i.index() < g.node_count() || j.index() < g.edge_count() {
assert!(!is_isomorphic_matching(
&*g,
&ng,
PartialEq::eq,
PartialEq::eq
));
} else {
assert!(is_isomorphic_matching(
&*g,
&ng,
PartialEq::eq,
PartialEq::eq
));
}
true
}
quickcheck::quickcheck(prop::<Undirected> as fn(_, _, _) -> bool);
quickcheck::quickcheck(prop::<Directed> as fn(_, _, _) -> bool);
}
#[test]
fn graph_remove_edge() {
fn prop<Ty: EdgeType>(mut g: Graph<(), (), Ty>, a: u8, b: u8) -> bool {
let a = node_index(a as usize);
let b = node_index(b as usize);
let edge = g.find_edge(a, b);
if !g.is_directed() {
assert_eq!(edge.is_some(), g.find_edge(b, a).is_some());
}
if let Some(ex) = edge {
assert!(g.remove_edge(ex).is_some());
}
assert_graph_consistent(&g);
assert!(g.find_edge(a, b).is_none());
assert!(g.neighbors(a).find(|x| *x == b).is_none());
if !g.is_directed() {
assert!(g.neighbors(b).find(|x| *x == a).is_none());
}
true
}
quickcheck::quickcheck(prop as fn(Graph<_, _, Undirected>, _, _) -> bool);
quickcheck::quickcheck(prop as fn(Graph<_, _, Directed>, _, _) -> bool);
}
#[cfg(feature = "stable_graph")]
#[test]
fn stable_graph_remove_edge() {
fn prop<Ty: EdgeType>(mut g: StableGraph<(), (), Ty>, a: u8, b: u8) -> bool {
let a = node_index(a as usize);
let b = node_index(b as usize);
let edge = g.find_edge(a, b);
if !g.is_directed() {
assert_eq!(edge.is_some(), g.find_edge(b, a).is_some());
}
if let Some(ex) = edge {
assert!(g.remove_edge(ex).is_some());
}
//assert_graph_consistent(&g);
assert!(g.find_edge(a, b).is_none());
assert!(g.neighbors(a).find(|x| *x == b).is_none());
if !g.is_directed() {
assert!(g.find_edge(b, a).is_none());
assert!(g.neighbors(b).find(|x| *x == a).is_none());
}
true
}
quickcheck::quickcheck(prop as fn(StableGraph<_, _, Undirected>, _, _) -> bool);
quickcheck::quickcheck(prop as fn(StableGraph<_, _, Directed>, _, _) -> bool);
}
#[cfg(feature = "stable_graph")]
#[test]
fn stable_graph_add_remove_edges() {
fn prop<Ty: EdgeType>(mut g: StableGraph<(), (), Ty>, edges: Vec<(u8, u8)>) -> bool {
for &(a, b) in &edges {
let a = node_index(a as usize);
let b = node_index(b as usize);
let edge = g.find_edge(a, b);
if edge.is_none() && g.contains_node(a) && g.contains_node(b) {
let _index = g.add_edge(a, b, ());
continue;
}
if !g.is_directed() {
assert_eq!(edge.is_some(), g.find_edge(b, a).is_some());
}
if let Some(ex) = edge {
assert!(g.remove_edge(ex).is_some());
}
//assert_graph_consistent(&g);
assert!(
g.find_edge(a, b).is_none(),
"failed to remove edge {:?} from graph {:?}",
(a, b),
g
);
assert!(g.neighbors(a).find(|x| *x == b).is_none());
if !g.is_directed() {
assert!(g.find_edge(b, a).is_none());
assert!(g.neighbors(b).find(|x| *x == a).is_none());
}
}
true
}
quickcheck::quickcheck(prop as fn(StableGraph<_, _, Undirected>, _) -> bool);
quickcheck::quickcheck(prop as fn(StableGraph<_, _, Directed>, _) -> bool);
}
fn assert_graphmap_consistent<N, E, Ty>(g: &GraphMap<N, E, Ty>)
where
Ty: EdgeType,
N: NodeTrait + fmt::Debug,
{
for (a, b, _weight) in g.all_edges() {
assert!(
g.contains_edge(a, b),
"Edge not in graph! {:?} to {:?}",
a,
b
);
assert!(
g.neighbors(a).find(|x| *x == b).is_some(),
"Edge {:?} not in neighbor list for {:?}",
(a, b),
a
);
if !g.is_directed() {
assert!(
g.neighbors(b).find(|x| *x == a).is_some(),
"Edge {:?} not in neighbor list for {:?}",
(b, a),
b
);
}
}
}
#[test]
fn graphmap_remove() {
fn prop<Ty: EdgeType>(mut g: GraphMap<i8, (), Ty>, a: i8, b: i8) -> bool {
//if g.edge_count() > 20 { return true; }
assert_graphmap_consistent(&g);
let contains = g.contains_edge(a, b);
if !g.is_directed() {
assert_eq!(contains, g.contains_edge(b, a));
}
assert_eq!(g.remove_edge(a, b).is_some(), contains);
assert!(!g.contains_edge(a, b) && g.neighbors(a).find(|x| *x == b).is_none());
//(g.is_directed() || g.neighbors(b).find(|x| *x == a).is_none()));
assert!(g.remove_edge(a, b).is_none());
assert_graphmap_consistent(&g);
true
}
quickcheck::quickcheck(prop as fn(DiGraphMap<_, _>, _, _) -> bool);
quickcheck::quickcheck(prop as fn(UnGraphMap<_, _>, _, _) -> bool);
}
#[test]
fn graphmap_add_remove() {
fn prop(mut g: UnGraphMap<i8, ()>, a: i8, b: i8) -> bool {
assert_eq!(g.contains_edge(a, b), g.add_edge(a, b, ()).is_some());
g.remove_edge(a, b);
!g.contains_edge(a, b)
&& g.neighbors(a).find(|x| *x == b).is_none()
&& g.neighbors(b).find(|x| *x == a).is_none()
}
quickcheck::quickcheck(prop as fn(_, _, _) -> bool);
}
fn sort_sccs<T: Ord>(v: &mut [Vec<T>]) {
for scc in &mut *v {
scc.sort();
}
v.sort();
}
quickcheck! {
fn graph_sccs(g: Graph<(), ()>) -> bool {
let mut sccs = kosaraju_scc(&g);
let mut tsccs = tarjan_scc(&g);
sort_sccs(&mut sccs);
sort_sccs(&mut tsccs);
if sccs != tsccs {
println!("{:?}",
Dot::with_config(&g, &[Config::EdgeNoLabel,
Config::NodeIndexLabel]));
println!("Sccs {:?}", sccs);
println!("Sccs (Tarjan) {:?}", tsccs);
return false;
}
true
}
}
quickcheck! {
fn kosaraju_scc_is_topo_sort(g: Graph<(), ()>) -> bool {
let tsccs = kosaraju_scc(&g);
let firsts = tsccs.iter().rev().map(|v| v[0]).collect::<Vec<_>>();
subset_is_topo_order(&g, &firsts)
}
}
quickcheck! {
fn tarjan_scc_is_topo_sort(g: Graph<(), ()>) -> bool {
let tsccs = tarjan_scc(&g);
let firsts = tsccs.iter().rev().map(|v| v[0]).collect::<Vec<_>>();
subset_is_topo_order(&g, &firsts)
}
}
quickcheck! {
// Reversed edges gives the same sccs (when sorted)
fn graph_reverse_sccs(g: Graph<(), ()>) -> bool {
let mut sccs = kosaraju_scc(&g);
let mut tsccs = kosaraju_scc(Reversed(&g));
sort_sccs(&mut sccs);
sort_sccs(&mut tsccs);
if sccs != tsccs {
println!("{:?}",
Dot::with_config(&g, &[Config::EdgeNoLabel,
Config::NodeIndexLabel]));
println!("Sccs {:?}", sccs);
println!("Sccs (Reversed) {:?}", tsccs);
return false;
}
true
}
}
quickcheck! {
// Reversed edges gives the same sccs (when sorted)
fn graphmap_reverse_sccs(g: DiGraphMap<u16, ()>) -> bool {
let mut sccs = kosaraju_scc(&g);
let mut tsccs = kosaraju_scc(Reversed(&g));
sort_sccs(&mut sccs);
sort_sccs(&mut tsccs);
if sccs != tsccs {
println!("{:?}",
Dot::with_config(&g, &[Config::EdgeNoLabel,
Config::NodeIndexLabel]));
println!("Sccs {:?}", sccs);
println!("Sccs (Reversed) {:?}", tsccs);
return false;
}
true
}
}
#[test]
fn graph_condensation_acyclic() {
fn prop(g: Graph<(), ()>) -> bool {
!is_cyclic_directed(&condensation(g, /* make_acyclic */ true))
}
quickcheck::quickcheck(prop as fn(_) -> bool);
}
#[derive(Debug, Clone)]
struct DAG<N: Default + Clone + Send + 'static>(Graph<N, ()>);
impl<N: Default + Clone + Send + 'static> Arbitrary for DAG<N> {
fn arbitrary<G: Gen>(g: &mut G) -> Self {
let nodes = usize::arbitrary(g);
if nodes == 0 {
return DAG(Graph::with_capacity(0, 0));
}
let split = g.gen_range(0., 1.);
let max_width = f64::sqrt(nodes as f64) as usize;
let tall = (max_width as f64 * split) as usize;
let fat = max_width - tall;
let edge_prob = 1. - (1. - g.gen_range(0., 1.)) * (1. - g.gen_range(0., 1.));
let edges = ((nodes as f64).powi(2) * edge_prob) as usize;
let mut gr = Graph::with_capacity(nodes, edges);
let mut nodes = 0;
for _ in 0..tall {
let cur_nodes = g.gen_range(0, fat);
for _ in 0..cur_nodes {
gr.add_node(N::default());
}
for j in 0..nodes {
for k in 0..cur_nodes {
if g.gen_range(0., 1.) < edge_prob {
gr.add_edge(NodeIndex::new(j), NodeIndex::new(k + nodes), ());
}
}
}
nodes += cur_nodes;
}
DAG(gr)
}
// shrink the graph by splitting it in two by a very
// simple algorithm, just even and odd node indices
fn shrink(&self) -> Box<dyn Iterator<Item = Self>> {
let self_ = self.clone();
Box::new((0..2).filter_map(move |x| {
let gr = self_.0.filter_map(
|i, w| {
if i.index() % 2 == x {
Some(w.clone())
} else {
None
}
},
|_, w| Some(w.clone()),
);
// make sure we shrink
if gr.node_count() < self_.0.node_count() {
Some(DAG(gr))
} else {
None
}
}))
}
}
fn is_topo_order<N>(gr: &Graph<N, (), Directed>, order: &[NodeIndex]) -> bool {
if gr.node_count() != order.len() {
println!(
"Graph ({}) and count ({}) had different amount of nodes.",
gr.node_count(),
order.len()
);
return false;
}
// check all the edges of the graph
for edge in gr.raw_edges() {
let a = edge.source();
let b = edge.target();
let ai = order.find(&a).unwrap();
let bi = order.find(&b).unwrap();
if ai >= bi {
println!("{:?} > {:?} ", a, b);
return false;
}
}
true
}
fn subset_is_topo_order<N>(gr: &Graph<N, (), Directed>, order: &[NodeIndex]) -> bool {
if gr.node_count() < order.len() {
println!(
"Graph (len={}) had less nodes than order (len={})",
gr.node_count(),
order.len()
);
return false;
}
// check all the edges of the graph
for edge in gr.raw_edges() {
let a = edge.source();
let b = edge.target();
if a == b {
continue;
}
// skip those that are not in the subset
let ai = match order.find(&a) {
Some(i) => i,
None => continue,
};
let bi = match order.find(&b) {
Some(i) => i,
None => continue,
};
if ai >= bi {
println!("{:?} > {:?} ", a, b);
return false;
}
}
true
}
#[test]
fn full_topo() {
fn prop(DAG(gr): DAG<()>) -> bool {
let order = toposort(&gr, None).unwrap();
is_topo_order(&gr, &order)
}
quickcheck::quickcheck(prop as fn(_) -> bool);
}
#[test]
fn full_topo_generic() {
fn prop_generic(DAG(mut gr): DAG<usize>) -> bool {
assert!(!is_cyclic_directed(&gr));
let mut index = 0;
let mut topo = Topo::new(&gr);
while let Some(nx) = topo.next(&gr) {
gr[nx] = index;
index += 1;
}
let mut order = Vec::new();
index = 0;
let mut topo = Topo::new(&gr);
while let Some(nx) = topo.next(&gr) {
order.push(nx);
assert_eq!(gr[nx], index);
index += 1;
}
if !is_topo_order(&gr, &order) {
println!("{:?}", gr);
return false;
}
{
order.clear();
let mut topo = Topo::new(&gr);
while let Some(nx) = topo.next(&gr) {
order.push(nx);
}
if !is_topo_order(&gr, &order) {
println!("{:?}", gr);
return false;
}
}
{
order.clear();
let init_nodes = gr.node_identifiers().filter(|n| {
gr.neighbors_directed(n.clone(), Direction::Incoming)
.next()
.is_none()
});
let mut topo = Topo::with_initials(&gr, init_nodes);
while let Some(nx) = topo.next(&gr) {
order.push(nx);
}
if !is_topo_order(&gr, &order) {
println!("{:?}", gr);
return false;
}
}
{
order.clear();
let mut topo = Topo::with_initials(&gr, gr.node_identifiers());
while let Some(nx) = topo.next(&gr) {
order.push(nx);
}
if !is_topo_order(&gr, &order) {
println!("{:?}", gr);
return false;
}
}
true
}
quickcheck::quickcheck(prop_generic as fn(_) -> bool);
}
quickcheck! {
// checks that the distances computed by dijkstra satisfy the triangle
// inequality.
fn dijkstra_triangle_ineq(g: Graph<u32, u32>, node: usize) -> bool {
if g.node_count() == 0 {
return true;
}
let v = node_index(node % g.node_count());
let distances = dijkstra(&g, v, None, |e| *e.weight());
for v2 in distances.keys() {
let dv2 = distances[v2];
// triangle inequality:
// d(v,u) <= d(v,v2) + w(v2,u)
for edge in g.edges(*v2) {
let u = edge.target();
let w = edge.weight();
if distances.contains_key(&u) && distances[&u] > dv2 + w {
return false;
}
}
}
true
}
}
quickcheck! {
// checks that the distances computed by k'th shortest path is always greater or equal compared to their dijkstra computation
fn k_shortest_path_(g: Graph<u32, u32>, node: usize) -> bool {
if g.node_count() == 0 {
return true;
}
let v = node_index(node % g.node_count());
let second_best_distances = k_shortest_path(&g, v, None, 2, |e| *e.weight());
let dijkstra_distances = dijkstra(&g, v, None, |e| *e.weight());
for v in second_best_distances.keys() {
if second_best_distances[&v] < dijkstra_distances[&v] {
return false;
}
}
true
}
}
quickcheck! {
// checks floyd_warshall against dijkstra results
fn floyd_warshall_(g: Graph<u32, u32>) -> bool {
if g.node_count() == 0 {
return true;
}
let fw_res = floyd_warshall(&g, |e| *e.weight()).unwrap();
for node1 in g.node_identifiers() {
let dijkstra_res = dijkstra(&g, node1, None, |e| *e.weight());
for node2 in g.node_identifiers() {
// if dijkstra found a path then the results must be same
if let Some(distance) = dijkstra_res.get(&node2) {
let floyd_distance = fw_res.get(&(node1, node2)).unwrap();
if distance != floyd_distance {
return false;
}
} else {
// if there are no path between two nodes then floyd_warshall will return maximum value possible
if *fw_res.get(&(node1, node2)).unwrap() != u32::MAX {
return false;
}
}
}
}
true
}
}
quickcheck! {
// checks that the complement of the complement is the same as the input if the input does not contain self-loops
fn complement_(g: Graph<u32, u32>, _node: usize) -> bool {
if g.node_count() == 0 {
return true;
}
for x in g.node_indices() {
if g.contains_edge(x, x) {
return true;
}
}
let mut complement_graph: Graph<u32, u32> = Graph::new();
let mut result: Graph<u32, u32> = Graph::new();
complement(&g, &mut complement_graph, 0);
complement(&complement_graph, &mut result, 0);
for x in g.node_indices() {
for y in g.node_indices() {
if g.contains_edge(x, y) != result.contains_edge(x, y){
return false;
}
}
}
true
}
}
fn set<I>(iter: I) -> HashSet<I::Item>
where
I: IntoIterator,
I::Item: Hash + Eq,
{
iter.into_iter().collect()
}
quickcheck! {
fn dfs_visit(gr: Graph<(), ()>, node: usize) -> bool {
use petgraph::visit::{Visitable, VisitMap};
use petgraph::visit::DfsEvent::*;
use petgraph::visit::{Time, depth_first_search};
if gr.node_count() == 0 {
return true;
}
let start_node = node_index(node % gr.node_count());
let invalid_time = Time(!0);
let mut discover_time = vec![invalid_time; gr.node_count()];
let mut finish_time = vec![invalid_time; gr.node_count()];
let mut has_tree_edge = gr.visit_map();
let mut edges = HashSet::new();
depth_first_search(&gr, Some(start_node).into_iter().chain(gr.node_indices()),
|evt| {
match evt {
Discover(n, t) => discover_time[n.index()] = t,
Finish(n, t) => finish_time[n.index()] = t,
TreeEdge(u, v) => {
// v is an ancestor of u
assert!(has_tree_edge.visit(v), "Two tree edges to {:?}!", v);
assert!(discover_time[v.index()] == invalid_time);
assert!(discover_time[u.index()] != invalid_time);
assert!(finish_time[u.index()] == invalid_time);
edges.insert((u, v));
}
BackEdge(u, v) => {
// u is an ancestor of v
assert!(discover_time[v.index()] != invalid_time);
assert!(finish_time[v.index()] == invalid_time);
edges.insert((u, v));
}
CrossForwardEdge(u, v) => {
edges.insert((u, v));
}
}
});
assert!(discover_time.iter().all(|x| *x != invalid_time));
assert!(finish_time.iter().all(|x| *x != invalid_time));
assert_eq!(edges.len(), gr.edge_count());
assert_eq!(edges, set(gr.edge_references().map(|e| (e.source(), e.target()))));
true
}
}
quickcheck! {
fn test_bellman_ford(gr: Graph<(), f32>) -> bool {
let mut gr = gr;
for elt in gr.edge_weights_mut() {
*elt = elt.abs();
}
if gr.node_count() == 0 {
return true;
}
for (i, start) in gr.node_indices().enumerate() {
if i >= 10 { break; } // testing all is too slow
bellman_ford(&gr, start).unwrap();
}
true
}
}
quickcheck! {
fn test_find_negative_cycle(gr: Graph<(), f32>) -> bool {
let gr = gr;
if gr.node_count() == 0 {
return true;
}
for (i, start) in gr.node_indices().enumerate() {
if i >= 10 { break; } // testing all is too slow
if let Some(path) = find_negative_cycle(&gr, start) {
assert!(path.len() >= 1);
}
}
true
}
}
quickcheck! {
fn test_bellman_ford_undir(gr: Graph<(), f32, Undirected>) -> bool {
let mut gr = gr;
for elt in gr.edge_weights_mut() {
*elt = elt.abs();
}
if gr.node_count() == 0 {
return true;
}
for (i, start) in gr.node_indices().enumerate() {
if i >= 10 { break; } // testing all is too slow
bellman_ford(&gr, start).unwrap();
}
true
}
}
defmac!(iter_eq a, b => a.eq(b));
defmac!(nodes_eq ref a, ref b => a.node_references().eq(b.node_references()));
defmac!(edgew_eq ref a, ref b => a.edge_references().eq(b.edge_references()));
defmac!(edges_eq ref a, ref b =>
iter_eq!(
a.edge_references().map(|e| (e.source(), e.target())),
b.edge_references().map(|e| (e.source(), e.target()))));
quickcheck! {
fn test_di_from(gr1: DiGraph<i32, i32>) -> () {
let sgr = StableGraph::from(gr1.clone());
let gr2 = Graph::from(sgr);
assert!(nodes_eq!(&gr1, &gr2));
assert!(edgew_eq!(&gr1, &gr2));
assert!(edges_eq!(&gr1, &gr2));
}
fn test_un_from(gr1: UnGraph<i32, i32>) -> () {
let sgr = StableGraph::from(gr1.clone());
let gr2 = Graph::from(sgr);
assert!(nodes_eq!(&gr1, &gr2));
assert!(edgew_eq!(&gr1, &gr2));
assert!(edges_eq!(&gr1, &gr2));
}
fn test_graph_from_stable_graph(gr1: StableDiGraph<usize, usize>) -> () {
let mut gr1 = gr1;
let gr2 = Graph::from(gr1.clone());
// renumber the stablegraph nodes and put the new index in the
// associated data
let mut index = 0;
for i in 0..gr1.node_bound() {
let ni = node_index(i);
if gr1.contains_node(ni) {
gr1[ni] = index;
index += 1;
}
}
if let Some(edge_bound) = gr1.edge_references().next_back()
.map(|ed| ed.id().index() + 1)
{
index = 0;
for i in 0..edge_bound {
let ni = edge_index(i);
if gr1.edge_weight(ni).is_some() {
gr1[ni] = index;
index += 1;
}
}
}
assert_equal(
// Remap the stablegraph to compact indices
gr1.edge_references().map(|ed| (edge_index(*ed.weight()), gr1[ed.source()], gr1[ed.target()])),
gr2.edge_references().map(|ed| (ed.id(), ed.source().index(), ed.target().index()))
);
}
fn stable_di_graph_map_id(gr1: StableDiGraph<usize, usize>) -> () {
let gr2 = gr1.map(|_, &nw| nw, |_, &ew| ew);
assert!(nodes_eq!(&gr1, &gr2));
assert!(edgew_eq!(&gr1, &gr2));
assert!(edges_eq!(&gr1, &gr2));
}
fn stable_un_graph_map_id(gr1: StableUnGraph<usize, usize>) -> () {
let gr2 = gr1.map(|_, &nw| nw, |_, &ew| ew);
assert!(nodes_eq!(&gr1, &gr2));
assert!(edgew_eq!(&gr1, &gr2));
assert!(edges_eq!(&gr1, &gr2));
}
fn stable_di_graph_filter_map_id(gr1: StableDiGraph<usize, usize>) -> () {
let gr2 = gr1.filter_map(|_, &nw| Some(nw), |_, &ew| Some(ew));
assert!(nodes_eq!(&gr1, &gr2));
assert!(edgew_eq!(&gr1, &gr2));
assert!(edges_eq!(&gr1, &gr2));
}
fn test_stable_un_graph_filter_map_id(gr1: StableUnGraph<usize, usize>) -> () {
let gr2 = gr1.filter_map(|_, &nw| Some(nw), |_, &ew| Some(ew));
assert!(nodes_eq!(&gr1, &gr2));
assert!(edgew_eq!(&gr1, &gr2));
assert!(edges_eq!(&gr1, &gr2));
}
fn stable_di_graph_filter_map_remove(gr1: Small<StableDiGraph<i32, i32>>,
nodes: Vec<usize>,
edges: Vec<usize>) -> ()
{
let gr2 = gr1.filter_map(|ix, &nw| {
if !nodes.contains(&ix.index()) { Some(nw) } else { None }
},
|ix, &ew| {
if !edges.contains(&ix.index()) { Some(ew) } else { None }
});
let check_nodes = &set(gr1.node_indices()) - &set(cloned(&nodes).map(node_index));
let mut check_edges = &set(gr1.edge_indices()) - &set(cloned(&edges).map(edge_index));
// remove all edges with endpoint in removed nodes
for edge in gr1.edge_references() {
if nodes.contains(&edge.source().index()) ||
nodes.contains(&edge.target().index()) {
check_edges.remove(&edge.id());
}
}
// assert maintained
for i in check_nodes {
assert_eq!(gr1[i], gr2[i]);
}
for i in check_edges {
assert_eq!(gr1[i], gr2[i]);
assert_eq!(gr1.edge_endpoints(i), gr2.edge_endpoints(i));
}
// assert removals
for i in nodes {
assert!(gr2.node_weight(node_index(i)).is_none());
}
for i in edges {
assert!(gr2.edge_weight(edge_index(i)).is_none());
}
}
}
fn naive_closure_foreach<G, F>(g: G, mut f: F)
where
G: Visitable + IntoNeighbors + IntoNodeIdentifiers,
F: FnMut(G::NodeId, G::NodeId),
{
let mut dfs = Dfs::empty(&g);
for i in g.node_identifiers() {
dfs.reset(&g);
dfs.move_to(i);
while let Some(nx) = dfs.next(&g) {
if i != nx {
f(i, nx);
}
}
}
}
fn naive_closure<G>(g: G) -> Vec<(G::NodeId, G::NodeId)>
where
G: Visitable + IntoNodeIdentifiers + IntoNeighbors,
{
let mut res = Vec::new();
naive_closure_foreach(g, |a, b| res.push((a, b)));
res
}
fn naive_closure_edgecount<G>(g: G) -> usize
where
G: Visitable + IntoNodeIdentifiers + IntoNeighbors,
{
let mut res = 0;
naive_closure_foreach(g, |_, _| res += 1);
res
}
quickcheck! {
fn test_tred(g: DAG<()>) -> bool {
let acyclic = g.0;
println!("acyclic graph {:#?}", &acyclic);
let toposort = toposort(&acyclic, None).unwrap();
println!("Toposort:");
for (new, old) in toposort.iter().enumerate() {
println!("{} -> {}", old.index(), new);
}
let (toposorted, revtopo): (petgraph::adj::List<(), usize>, _) =
petgraph::algo::tred::dag_to_toposorted_adjacency_list(&acyclic, &toposort);
println!("checking revtopo");
for (i, ix) in toposort.iter().enumerate() {
assert_eq!(i, revtopo[ix.index()]);
}
println!("toposorted adjacency list: {:#?}", &toposorted);
let (tred, tclos) = petgraph::algo::tred::dag_transitive_reduction_closure(&toposorted);
println!("tred: {:#?}", &tred);
println!("tclos: {:#?}", &tclos);
if tred.node_count() != tclos.node_count() {
println!("Different node count");
return false;
}
if acyclic.node_count() != tclos.node_count() {
println!("Different node count from original graph");
return false;
}
// check the closure
let mut clos_edges: Vec<(_, _)> = tclos.edge_references().map(|i| (i.source(), i.target())).collect();
clos_edges.sort();
let mut tred_closure = naive_closure(&tred);
tred_closure.sort();
if tred_closure != clos_edges {
println!("tclos is not the transitive closure of tred");
return false
}
// check the transitive reduction is a transitive reduction
for i in tred.edge_references() {
let filtered = EdgeFiltered::from_fn(&tred, |edge| {
edge.source() !=i.source() || edge.target() != i.target()
});
let new = naive_closure_edgecount(&filtered);
if new >= clos_edges.len() {
println!("when removing ({} -> {}) the transitive closure does not shrink",
i.source().index(), i.target().index());
return false
}
}
// check that the transitive reduction is included in the original graph
for i in tred.edge_references() {
if acyclic.find_edge(toposort[i.source().index()], toposort[i.target().index()]).is_none() {
println!("tred is not included in the original graph");
return false
}
}
println!("ok!");
true
}
}
quickcheck! {
fn greedy_fas_remaining_graph_is_acyclic(g: StableDiGraph<(), ()>) -> bool {
let mut g = g;
let fas: Vec<EdgeIndex> = greedy_feedback_arc_set(&g).map(|e| e.id()).collect();
for edge_id in fas {
g.remove_edge(edge_id);
}
!is_cyclic_directed(&g)
}
/// Assert that the size of the feedback arc set of a tournament does not exceed
/// **|E| / 2 - |V| / 6**
fn greedy_fas_performance_within_bound(t: Tournament<(), ()>) -> bool {
let Tournament(g) = t;
let expected_bound = if g.node_count() < 2 {
0
} else {
((g.edge_count() as f64) / 2.0 - (g.node_count() as f64) / 6.0) as usize
};
let fas_size = greedy_feedback_arc_set(&g).count();
fas_size <= expected_bound
}
}
fn is_valid_matching<G: NodeIndexable>(m: &Matching<G>) -> bool {
// A set of edges is a matching if no two edges from the matching share an
// endpoint.
for (s1, t1) in m.edges() {
for (s2, t2) in m.edges() {
if s1 == s2 && t1 == t2 {
continue;
}
if s1 == s2 || s1 == t2 || t1 == s2 || t1 == t2 {
// Two edges share an endpoint.
return false;
}
}
}
true
}
fn is_maximum_matching<G: NodeIndexable + IntoEdges + IntoNodeIdentifiers + Visitable>(
g: G,
m: &Matching<G>,
) -> bool {
// Berge's lemma: a matching is maximum iff there is no augmenting path (a
// path that starts and ends in unmatched vertices, and alternates between
// matched and unmatched edges). Thus if we find an augmenting path, the
// matching is not maximum.
//
// Start with an unmatched node and traverse the graph alternating matched
// and unmatched edges. If an unmatched node is found, then an augmenting
// path was found.
for unmatched in g.node_identifiers().filter(|u| !m.contains_node(*u)) {
let visited = &mut g.visit_map();
let mut stack = Vec::new();
stack.push((unmatched, false));
while let Some((u, do_matched_edges)) = stack.pop() {
if visited.visit(u) {
for e in g.edges(u) {
if e.source() == e.target() {
// Ignore self-loops.
continue;
}
let is_matched = m.contains_edge(e.source(), e.target());
if do_matched_edges && is_matched || !do_matched_edges && !is_matched {
stack.push((e.target(), !do_matched_edges));
// Found another free node (other than the starting one)
// that is unmatched - an augmenting path.
if !is_matched && !m.contains_node(e.target()) && e.target() != unmatched {
return false;
}
}
}
}
}
}
true
}
fn is_perfect_matching<G: NodeCount + NodeIndexable>(g: G, m: &Matching<G>) -> bool {
// By definition.
g.node_count() % 2 == 0 && m.edges().count() == g.node_count() / 2
}
quickcheck! {
fn matching(g: Graph<(), (), Undirected>) -> bool {
let m1 = greedy_matching(&g);
let m2 = maximum_matching(&g);
assert!(is_valid_matching(&m1), "greedy_matching returned an invalid matching");
assert!(is_valid_matching(&m2), "maximum_matching returned an invalid matching");
assert!(is_maximum_matching(&g, &m2), "maximum_matching returned a matching that is not maximum");
assert_eq!(m1.is_perfect(), is_perfect_matching(&g, &m1), "greedy_matching incorrectly determined whether the matching is perfect");
assert_eq!(m2.is_perfect(), is_perfect_matching(&g, &m2), "maximum_matching incorrectly determined whether the matching is perfect");
true
}
fn matching_in_stable_graph(g: StableGraph<(), (), Undirected>) -> bool {
let m1 = greedy_matching(&g);
let m2 = maximum_matching(&g);
assert!(is_valid_matching(&m1), "greedy_matching returned an invalid matching");
assert!(is_valid_matching(&m2), "maximum_matching returned an invalid matching");
assert!(is_maximum_matching(&g, &m2), "maximum_matching returned a matching that is not maximum");
assert_eq!(m1.is_perfect(), is_perfect_matching(&g, &m1), "greedy_matching incorrectly determined whether the matching is perfect");
assert_eq!(m2.is_perfect(), is_perfect_matching(&g, &m2), "maximum_matching incorrectly determined whether the matching is perfect");
true
}
}
quickcheck! {
// The ranks are probabilities,
// as such they are positive and they should sum up to 1.
fn test_page_rank_proba(gr: Graph<(), f32>) -> bool {
if gr.node_count() == 0 {
return true;
}
let tol = 1e-10;
let ranks: Vec<f64> = page_rank(&gr, 0.85_f64, 5);
let at_least_one_neg_rank = ranks.iter().any(|rank| *rank < 0.);
let not_sumup_to_one = (ranks.iter().sum::<f64>() - 1.).abs() > tol;
if at_least_one_neg_rank | not_sumup_to_one{
return false;
}
true
}
}
fn sum_flows<N, F: std::iter::Sum + Copy>(
gr: &Graph<N, F>,
flows: &[F],
node: NodeIndex,
dir: Direction,
) -> F {
gr.edges_directed(node, dir)
.map(|edge| flows[EdgeIndexable::to_index(&gr, edge.id())])
.sum::<F>()
}
quickcheck! {
// 1. (Capacity)
// The flows should be <= capacities
// 2. (Flow conservation)
// For every internal node (i.e a node different from the
// source node and the destination (or sink) node), the sum
// of incoming flows (i.e flows of incoming edges) is equal
// to the sum of the outgoing flows (i.e flows of outgoing edges).
// 3. (Maximum flow)
// It is equal to the sum of the destination node incoming flows and
// also the sum of the outgoing flows of the source node.
fn test_ford_fulkerson_flows(gr: Graph<usize, u32>) -> bool {
if gr.node_count() <= 1 || gr.edge_count() == 0 {
return true;
}
let source = NodeIndex::from(0);
let destination = NodeIndex::from(gr.node_count() as u32 / 2);
let (max_flow, flows) = ford_fulkerson(&gr, source, destination);
let capacity_constraint = flows
.iter()
.enumerate()
.all(|(ix, flow)| flow <= gr.edge_weight(EdgeIndexable::from_index(&gr, ix)).unwrap());
let flow_conservation_constraint = (0..gr.node_count()).all(|ix| {
let node = NodeIndexable::from_index(&gr, ix);
if (node != source) && (node != destination){
sum_flows(&gr, &flows, node, Direction::Outgoing)
== sum_flows(&gr, &flows, node, Direction::Incoming)
} else {true}
});
let max_flow_constaint = (sum_flows(&gr, &flows, source, Direction::Outgoing) == max_flow)
&& (sum_flows(&gr, &flows, destination, Direction::Incoming) == max_flow);
return capacity_constraint && flow_conservation_constraint && max_flow_constaint;
}
}