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// Copyright 2016 Google Inc.
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
// Code generated by protoc-gen-go. DO NOT EDIT.
// versions:
// protoc-gen-go v1.22.0
// protoc v3.12.2
// source: google/genomics/v1/annotations.proto
package genomics
import (
context "context"
reflect "reflect"
sync "sync"
proto "github.com/golang/protobuf/proto"
empty "github.com/golang/protobuf/ptypes/empty"
_struct "github.com/golang/protobuf/ptypes/struct"
wrappers "github.com/golang/protobuf/ptypes/wrappers"
_ "google.golang.org/genproto/googleapis/api/annotations"
status "google.golang.org/genproto/googleapis/rpc/status"
field_mask "google.golang.org/genproto/protobuf/field_mask"
grpc "google.golang.org/grpc"
codes "google.golang.org/grpc/codes"
status1 "google.golang.org/grpc/status"
protoreflect "google.golang.org/protobuf/reflect/protoreflect"
protoimpl "google.golang.org/protobuf/runtime/protoimpl"
)
const (
// Verify that this generated code is sufficiently up-to-date.
_ = protoimpl.EnforceVersion(20 - protoimpl.MinVersion)
// Verify that runtime/protoimpl is sufficiently up-to-date.
_ = protoimpl.EnforceVersion(protoimpl.MaxVersion - 20)
)
// This is a compile-time assertion that a sufficiently up-to-date version
// of the legacy proto package is being used.
const _ = proto.ProtoPackageIsVersion4
// When an [Annotation][google.genomics.v1.Annotation] or
// [AnnotationSet][google.genomics.v1.AnnotationSet] is created, if `type` is
// not specified it will be set to `GENERIC`.
type AnnotationType int32
const (
AnnotationType_ANNOTATION_TYPE_UNSPECIFIED AnnotationType = 0
// A `GENERIC` annotation type should be used when no other annotation
// type will suffice. This represents an untyped annotation of the reference
// genome.
AnnotationType_GENERIC AnnotationType = 1
// A `VARIANT` annotation type.
AnnotationType_VARIANT AnnotationType = 2
// A `GENE` annotation type represents the existence of a gene at the
// associated reference coordinates. The start coordinate is typically the
// gene's transcription start site and the end is typically the end of the
// gene's last exon.
AnnotationType_GENE AnnotationType = 3
// A `TRANSCRIPT` annotation type represents the assertion that a
// particular region of the reference genome may be transcribed as RNA.
AnnotationType_TRANSCRIPT AnnotationType = 4
)
// Enum value maps for AnnotationType.
var (
AnnotationType_name = map[int32]string{
0: "ANNOTATION_TYPE_UNSPECIFIED",
1: "GENERIC",
2: "VARIANT",
3: "GENE",
4: "TRANSCRIPT",
}
AnnotationType_value = map[string]int32{
"ANNOTATION_TYPE_UNSPECIFIED": 0,
"GENERIC": 1,
"VARIANT": 2,
"GENE": 3,
"TRANSCRIPT": 4,
}
)
func (x AnnotationType) Enum() *AnnotationType {
p := new(AnnotationType)
*p = x
return p
}
func (x AnnotationType) String() string {
return protoimpl.X.EnumStringOf(x.Descriptor(), protoreflect.EnumNumber(x))
}
func (AnnotationType) Descriptor() protoreflect.EnumDescriptor {
return file_google_genomics_v1_annotations_proto_enumTypes[0].Descriptor()
}
func (AnnotationType) Type() protoreflect.EnumType {
return &file_google_genomics_v1_annotations_proto_enumTypes[0]
}
func (x AnnotationType) Number() protoreflect.EnumNumber {
return protoreflect.EnumNumber(x)
}
// Deprecated: Use AnnotationType.Descriptor instead.
func (AnnotationType) EnumDescriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{0}
}
type VariantAnnotation_Type int32
const (
VariantAnnotation_TYPE_UNSPECIFIED VariantAnnotation_Type = 0
// `TYPE_OTHER` should be used when no other Type will suffice.
// Further explanation of the variant type may be included in the
// [info][google.genomics.v1.Annotation.info] field.
VariantAnnotation_TYPE_OTHER VariantAnnotation_Type = 1
// `INSERTION` indicates an insertion.
VariantAnnotation_INSERTION VariantAnnotation_Type = 2
// `DELETION` indicates a deletion.
VariantAnnotation_DELETION VariantAnnotation_Type = 3
// `SUBSTITUTION` indicates a block substitution of
// two or more nucleotides.
VariantAnnotation_SUBSTITUTION VariantAnnotation_Type = 4
// `SNP` indicates a single nucleotide polymorphism.
VariantAnnotation_SNP VariantAnnotation_Type = 5
// `STRUCTURAL` indicates a large structural variant,
// including chromosomal fusions, inversions, etc.
VariantAnnotation_STRUCTURAL VariantAnnotation_Type = 6
// `CNV` indicates a variation in copy number.
VariantAnnotation_CNV VariantAnnotation_Type = 7
)
// Enum value maps for VariantAnnotation_Type.
var (
VariantAnnotation_Type_name = map[int32]string{
0: "TYPE_UNSPECIFIED",
1: "TYPE_OTHER",
2: "INSERTION",
3: "DELETION",
4: "SUBSTITUTION",
5: "SNP",
6: "STRUCTURAL",
7: "CNV",
}
VariantAnnotation_Type_value = map[string]int32{
"TYPE_UNSPECIFIED": 0,
"TYPE_OTHER": 1,
"INSERTION": 2,
"DELETION": 3,
"SUBSTITUTION": 4,
"SNP": 5,
"STRUCTURAL": 6,
"CNV": 7,
}
)
func (x VariantAnnotation_Type) Enum() *VariantAnnotation_Type {
p := new(VariantAnnotation_Type)
*p = x
return p
}
func (x VariantAnnotation_Type) String() string {
return protoimpl.X.EnumStringOf(x.Descriptor(), protoreflect.EnumNumber(x))
}
func (VariantAnnotation_Type) Descriptor() protoreflect.EnumDescriptor {
return file_google_genomics_v1_annotations_proto_enumTypes[1].Descriptor()
}
func (VariantAnnotation_Type) Type() protoreflect.EnumType {
return &file_google_genomics_v1_annotations_proto_enumTypes[1]
}
func (x VariantAnnotation_Type) Number() protoreflect.EnumNumber {
return protoreflect.EnumNumber(x)
}
// Deprecated: Use VariantAnnotation_Type.Descriptor instead.
func (VariantAnnotation_Type) EnumDescriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{2, 0}
}
type VariantAnnotation_Effect int32
const (
VariantAnnotation_EFFECT_UNSPECIFIED VariantAnnotation_Effect = 0
// `EFFECT_OTHER` should be used when no other Effect
// will suffice.
VariantAnnotation_EFFECT_OTHER VariantAnnotation_Effect = 1
// `FRAMESHIFT` indicates a mutation in which the insertion or
// deletion of nucleotides resulted in a frameshift change.
VariantAnnotation_FRAMESHIFT VariantAnnotation_Effect = 2
// `FRAME_PRESERVING_INDEL` indicates a mutation in which a
// multiple of three nucleotides has been inserted or deleted, resulting
// in no change to the reading frame of the coding sequence.
VariantAnnotation_FRAME_PRESERVING_INDEL VariantAnnotation_Effect = 3
// `SYNONYMOUS_SNP` indicates a single nucleotide polymorphism
// mutation that results in no amino acid change.
VariantAnnotation_SYNONYMOUS_SNP VariantAnnotation_Effect = 4
// `NONSYNONYMOUS_SNP` indicates a single nucleotide
// polymorphism mutation that results in an amino acid change.
VariantAnnotation_NONSYNONYMOUS_SNP VariantAnnotation_Effect = 5
// `STOP_GAIN` indicates a mutation that leads to the creation
// of a stop codon at the variant site. Frameshift mutations creating
// downstream stop codons do not count as `STOP_GAIN`.
VariantAnnotation_STOP_GAIN VariantAnnotation_Effect = 6
// `STOP_LOSS` indicates a mutation that eliminates a
// stop codon at the variant site.
VariantAnnotation_STOP_LOSS VariantAnnotation_Effect = 7
// `SPLICE_SITE_DISRUPTION` indicates that this variant is
// found in a splice site for the associated transcript, and alters the
// normal splicing pattern.
VariantAnnotation_SPLICE_SITE_DISRUPTION VariantAnnotation_Effect = 8
)
// Enum value maps for VariantAnnotation_Effect.
var (
VariantAnnotation_Effect_name = map[int32]string{
0: "EFFECT_UNSPECIFIED",
1: "EFFECT_OTHER",
2: "FRAMESHIFT",
3: "FRAME_PRESERVING_INDEL",
4: "SYNONYMOUS_SNP",
5: "NONSYNONYMOUS_SNP",
6: "STOP_GAIN",
7: "STOP_LOSS",
8: "SPLICE_SITE_DISRUPTION",
}
VariantAnnotation_Effect_value = map[string]int32{
"EFFECT_UNSPECIFIED": 0,
"EFFECT_OTHER": 1,
"FRAMESHIFT": 2,
"FRAME_PRESERVING_INDEL": 3,
"SYNONYMOUS_SNP": 4,
"NONSYNONYMOUS_SNP": 5,
"STOP_GAIN": 6,
"STOP_LOSS": 7,
"SPLICE_SITE_DISRUPTION": 8,
}
)
func (x VariantAnnotation_Effect) Enum() *VariantAnnotation_Effect {
p := new(VariantAnnotation_Effect)
*p = x
return p
}
func (x VariantAnnotation_Effect) String() string {
return protoimpl.X.EnumStringOf(x.Descriptor(), protoreflect.EnumNumber(x))
}
func (VariantAnnotation_Effect) Descriptor() protoreflect.EnumDescriptor {
return file_google_genomics_v1_annotations_proto_enumTypes[2].Descriptor()
}
func (VariantAnnotation_Effect) Type() protoreflect.EnumType {
return &file_google_genomics_v1_annotations_proto_enumTypes[2]
}
func (x VariantAnnotation_Effect) Number() protoreflect.EnumNumber {
return protoreflect.EnumNumber(x)
}
// Deprecated: Use VariantAnnotation_Effect.Descriptor instead.
func (VariantAnnotation_Effect) EnumDescriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{2, 1}
}
type VariantAnnotation_ClinicalSignificance int32
const (
VariantAnnotation_CLINICAL_SIGNIFICANCE_UNSPECIFIED VariantAnnotation_ClinicalSignificance = 0
// `OTHER` should be used when no other clinical significance
// value will suffice.
VariantAnnotation_CLINICAL_SIGNIFICANCE_OTHER VariantAnnotation_ClinicalSignificance = 1
VariantAnnotation_UNCERTAIN VariantAnnotation_ClinicalSignificance = 2
VariantAnnotation_BENIGN VariantAnnotation_ClinicalSignificance = 3
VariantAnnotation_LIKELY_BENIGN VariantAnnotation_ClinicalSignificance = 4
VariantAnnotation_LIKELY_PATHOGENIC VariantAnnotation_ClinicalSignificance = 5
VariantAnnotation_PATHOGENIC VariantAnnotation_ClinicalSignificance = 6
VariantAnnotation_DRUG_RESPONSE VariantAnnotation_ClinicalSignificance = 7
VariantAnnotation_HISTOCOMPATIBILITY VariantAnnotation_ClinicalSignificance = 8
VariantAnnotation_CONFERS_SENSITIVITY VariantAnnotation_ClinicalSignificance = 9
VariantAnnotation_RISK_FACTOR VariantAnnotation_ClinicalSignificance = 10
VariantAnnotation_ASSOCIATION VariantAnnotation_ClinicalSignificance = 11
VariantAnnotation_PROTECTIVE VariantAnnotation_ClinicalSignificance = 12
// `MULTIPLE_REPORTED` should be used when multiple clinical
// signficances are reported for a variant. The original clinical
// significance values may be provided in the `info` field.
VariantAnnotation_MULTIPLE_REPORTED VariantAnnotation_ClinicalSignificance = 13
)
// Enum value maps for VariantAnnotation_ClinicalSignificance.
var (
VariantAnnotation_ClinicalSignificance_name = map[int32]string{
0: "CLINICAL_SIGNIFICANCE_UNSPECIFIED",
1: "CLINICAL_SIGNIFICANCE_OTHER",
2: "UNCERTAIN",
3: "BENIGN",
4: "LIKELY_BENIGN",
5: "LIKELY_PATHOGENIC",
6: "PATHOGENIC",
7: "DRUG_RESPONSE",
8: "HISTOCOMPATIBILITY",
9: "CONFERS_SENSITIVITY",
10: "RISK_FACTOR",
11: "ASSOCIATION",
12: "PROTECTIVE",
13: "MULTIPLE_REPORTED",
}
VariantAnnotation_ClinicalSignificance_value = map[string]int32{
"CLINICAL_SIGNIFICANCE_UNSPECIFIED": 0,
"CLINICAL_SIGNIFICANCE_OTHER": 1,
"UNCERTAIN": 2,
"BENIGN": 3,
"LIKELY_BENIGN": 4,
"LIKELY_PATHOGENIC": 5,
"PATHOGENIC": 6,
"DRUG_RESPONSE": 7,
"HISTOCOMPATIBILITY": 8,
"CONFERS_SENSITIVITY": 9,
"RISK_FACTOR": 10,
"ASSOCIATION": 11,
"PROTECTIVE": 12,
"MULTIPLE_REPORTED": 13,
}
)
func (x VariantAnnotation_ClinicalSignificance) Enum() *VariantAnnotation_ClinicalSignificance {
p := new(VariantAnnotation_ClinicalSignificance)
*p = x
return p
}
func (x VariantAnnotation_ClinicalSignificance) String() string {
return protoimpl.X.EnumStringOf(x.Descriptor(), protoreflect.EnumNumber(x))
}
func (VariantAnnotation_ClinicalSignificance) Descriptor() protoreflect.EnumDescriptor {
return file_google_genomics_v1_annotations_proto_enumTypes[3].Descriptor()
}
func (VariantAnnotation_ClinicalSignificance) Type() protoreflect.EnumType {
return &file_google_genomics_v1_annotations_proto_enumTypes[3]
}
func (x VariantAnnotation_ClinicalSignificance) Number() protoreflect.EnumNumber {
return protoreflect.EnumNumber(x)
}
// Deprecated: Use VariantAnnotation_ClinicalSignificance.Descriptor instead.
func (VariantAnnotation_ClinicalSignificance) EnumDescriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{2, 2}
}
// An annotation set is a logical grouping of annotations that share consistent
// type information and provenance. Examples of annotation sets include 'all
// genes from refseq', and 'all variant annotations from ClinVar'.
type AnnotationSet struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The server-generated annotation set ID, unique across all annotation sets.
Id string `protobuf:"bytes,1,opt,name=id,proto3" json:"id,omitempty"`
// The dataset to which this annotation set belongs.
DatasetId string `protobuf:"bytes,2,opt,name=dataset_id,json=datasetId,proto3" json:"dataset_id,omitempty"`
// The ID of the reference set that defines the coordinate space for this
// set's annotations.
ReferenceSetId string `protobuf:"bytes,3,opt,name=reference_set_id,json=referenceSetId,proto3" json:"reference_set_id,omitempty"`
// The display name for this annotation set.
Name string `protobuf:"bytes,4,opt,name=name,proto3" json:"name,omitempty"`
// The source URI describing the file from which this annotation set was
// generated, if any.
SourceUri string `protobuf:"bytes,5,opt,name=source_uri,json=sourceUri,proto3" json:"source_uri,omitempty"`
// The type of annotations contained within this set.
Type AnnotationType `protobuf:"varint,6,opt,name=type,proto3,enum=google.genomics.v1.AnnotationType" json:"type,omitempty"`
// A map of additional read alignment information. This must be of the form
// map<string, string[]> (string key mapping to a list of string values).
Info map[string]*_struct.ListValue `protobuf:"bytes,17,rep,name=info,proto3" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"bytes,2,opt,name=value,proto3"`
}
func (x *AnnotationSet) Reset() {
*x = AnnotationSet{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[0]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *AnnotationSet) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*AnnotationSet) ProtoMessage() {}
func (x *AnnotationSet) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[0]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use AnnotationSet.ProtoReflect.Descriptor instead.
func (*AnnotationSet) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{0}
}
func (x *AnnotationSet) GetId() string {
if x != nil {
return x.Id
}
return ""
}
func (x *AnnotationSet) GetDatasetId() string {
if x != nil {
return x.DatasetId
}
return ""
}
func (x *AnnotationSet) GetReferenceSetId() string {
if x != nil {
return x.ReferenceSetId
}
return ""
}
func (x *AnnotationSet) GetName() string {
if x != nil {
return x.Name
}
return ""
}
func (x *AnnotationSet) GetSourceUri() string {
if x != nil {
return x.SourceUri
}
return ""
}
func (x *AnnotationSet) GetType() AnnotationType {
if x != nil {
return x.Type
}
return AnnotationType_ANNOTATION_TYPE_UNSPECIFIED
}
func (x *AnnotationSet) GetInfo() map[string]*_struct.ListValue {
if x != nil {
return x.Info
}
return nil
}
// An annotation describes a region of reference genome. The value of an
// annotation may be one of several canonical types, supplemented by arbitrary
// info tags. An annotation is not inherently associated with a specific
// sample or individual (though a client could choose to use annotations in
// this way). Example canonical annotation types are `GENE` and
// `VARIANT`.
type Annotation struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The server-generated annotation ID, unique across all annotations.
Id string `protobuf:"bytes,1,opt,name=id,proto3" json:"id,omitempty"`
// The annotation set to which this annotation belongs.
AnnotationSetId string `protobuf:"bytes,2,opt,name=annotation_set_id,json=annotationSetId,proto3" json:"annotation_set_id,omitempty"`
// The display name of this annotation.
Name string `protobuf:"bytes,3,opt,name=name,proto3" json:"name,omitempty"`
// The ID of the Google Genomics reference associated with this range.
ReferenceId string `protobuf:"bytes,4,opt,name=reference_id,json=referenceId,proto3" json:"reference_id,omitempty"`
// The display name corresponding to the reference specified by
// `referenceId`, for example `chr1`, `1`, or `chrX`.
ReferenceName string `protobuf:"bytes,5,opt,name=reference_name,json=referenceName,proto3" json:"reference_name,omitempty"`
// The start position of the range on the reference, 0-based inclusive.
Start int64 `protobuf:"varint,6,opt,name=start,proto3" json:"start,omitempty"`
// The end position of the range on the reference, 0-based exclusive.
End int64 `protobuf:"varint,7,opt,name=end,proto3" json:"end,omitempty"`
// Whether this range refers to the reverse strand, as opposed to the forward
// strand. Note that regardless of this field, the start/end position of the
// range always refer to the forward strand.
ReverseStrand bool `protobuf:"varint,8,opt,name=reverse_strand,json=reverseStrand,proto3" json:"reverse_strand,omitempty"`
// The data type for this annotation. Must match the containing annotation
// set's type.
Type AnnotationType `protobuf:"varint,9,opt,name=type,proto3,enum=google.genomics.v1.AnnotationType" json:"type,omitempty"`
// Types that are assignable to Value:
// *Annotation_Variant
// *Annotation_Transcript
Value isAnnotation_Value `protobuf_oneof:"value"`
// A map of additional read alignment information. This must be of the form
// map<string, string[]> (string key mapping to a list of string values).
Info map[string]*_struct.ListValue `protobuf:"bytes,12,rep,name=info,proto3" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"bytes,2,opt,name=value,proto3"`
}
func (x *Annotation) Reset() {
*x = Annotation{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[1]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *Annotation) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*Annotation) ProtoMessage() {}
func (x *Annotation) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[1]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use Annotation.ProtoReflect.Descriptor instead.
func (*Annotation) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{1}
}
func (x *Annotation) GetId() string {
if x != nil {
return x.Id
}
return ""
}
func (x *Annotation) GetAnnotationSetId() string {
if x != nil {
return x.AnnotationSetId
}
return ""
}
func (x *Annotation) GetName() string {
if x != nil {
return x.Name
}
return ""
}
func (x *Annotation) GetReferenceId() string {
if x != nil {
return x.ReferenceId
}
return ""
}
func (x *Annotation) GetReferenceName() string {
if x != nil {
return x.ReferenceName
}
return ""
}
func (x *Annotation) GetStart() int64 {
if x != nil {
return x.Start
}
return 0
}
func (x *Annotation) GetEnd() int64 {
if x != nil {
return x.End
}
return 0
}
func (x *Annotation) GetReverseStrand() bool {
if x != nil {
return x.ReverseStrand
}
return false
}
func (x *Annotation) GetType() AnnotationType {
if x != nil {
return x.Type
}
return AnnotationType_ANNOTATION_TYPE_UNSPECIFIED
}
func (m *Annotation) GetValue() isAnnotation_Value {
if m != nil {
return m.Value
}
return nil
}
func (x *Annotation) GetVariant() *VariantAnnotation {
if x, ok := x.GetValue().(*Annotation_Variant); ok {
return x.Variant
}
return nil
}
func (x *Annotation) GetTranscript() *Transcript {
if x, ok := x.GetValue().(*Annotation_Transcript); ok {
return x.Transcript
}
return nil
}
func (x *Annotation) GetInfo() map[string]*_struct.ListValue {
if x != nil {
return x.Info
}
return nil
}
type isAnnotation_Value interface {
isAnnotation_Value()
}
type Annotation_Variant struct {
// A variant annotation, which describes the effect of a variant on the
// genome, the coding sequence, and/or higher level consequences at the
// organism level e.g. pathogenicity. This field is only set for annotations
// of type `VARIANT`.
Variant *VariantAnnotation `protobuf:"bytes,10,opt,name=variant,proto3,oneof"`
}
type Annotation_Transcript struct {
// A transcript value represents the assertion that a particular region of
// the reference genome may be transcribed as RNA. An alternative splicing
// pattern would be represented as a separate transcript object. This field
// is only set for annotations of type `TRANSCRIPT`.
Transcript *Transcript `protobuf:"bytes,11,opt,name=transcript,proto3,oneof"`
}
func (*Annotation_Variant) isAnnotation_Value() {}
func (*Annotation_Transcript) isAnnotation_Value() {}
type VariantAnnotation struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// Type has been adapted from ClinVar's list of variant types.
Type VariantAnnotation_Type `protobuf:"varint,1,opt,name=type,proto3,enum=google.genomics.v1.VariantAnnotation_Type" json:"type,omitempty"`
// Effect of the variant on the coding sequence.
Effect VariantAnnotation_Effect `protobuf:"varint,2,opt,name=effect,proto3,enum=google.genomics.v1.VariantAnnotation_Effect" json:"effect,omitempty"`
// The alternate allele for this variant. If multiple alternate alleles
// exist at this location, create a separate variant for each one, as they
// may represent distinct conditions.
AlternateBases string `protobuf:"bytes,3,opt,name=alternate_bases,json=alternateBases,proto3" json:"alternate_bases,omitempty"`
// Google annotation ID of the gene affected by this variant. This should
// be provided when the variant is created.
GeneId string `protobuf:"bytes,4,opt,name=gene_id,json=geneId,proto3" json:"gene_id,omitempty"`
// Google annotation IDs of the transcripts affected by this variant. These
// should be provided when the variant is created.
TranscriptIds []string `protobuf:"bytes,5,rep,name=transcript_ids,json=transcriptIds,proto3" json:"transcript_ids,omitempty"`
// The set of conditions associated with this variant.
// A condition describes the way a variant influences human health.
Conditions []*VariantAnnotation_ClinicalCondition `protobuf:"bytes,6,rep,name=conditions,proto3" json:"conditions,omitempty"`
// Describes the clinical significance of a variant.
// It is adapted from the ClinVar controlled vocabulary for clinical
// significance described at:
// http://www.ncbi.nlm.nih.gov/clinvar/docs/clinsig/
ClinicalSignificance VariantAnnotation_ClinicalSignificance `protobuf:"varint,7,opt,name=clinical_significance,json=clinicalSignificance,proto3,enum=google.genomics.v1.VariantAnnotation_ClinicalSignificance" json:"clinical_significance,omitempty"`
}
func (x *VariantAnnotation) Reset() {
*x = VariantAnnotation{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[2]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *VariantAnnotation) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*VariantAnnotation) ProtoMessage() {}
func (x *VariantAnnotation) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[2]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use VariantAnnotation.ProtoReflect.Descriptor instead.
func (*VariantAnnotation) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{2}
}
func (x *VariantAnnotation) GetType() VariantAnnotation_Type {
if x != nil {
return x.Type
}
return VariantAnnotation_TYPE_UNSPECIFIED
}
func (x *VariantAnnotation) GetEffect() VariantAnnotation_Effect {
if x != nil {
return x.Effect
}
return VariantAnnotation_EFFECT_UNSPECIFIED
}
func (x *VariantAnnotation) GetAlternateBases() string {
if x != nil {
return x.AlternateBases
}
return ""
}
func (x *VariantAnnotation) GetGeneId() string {
if x != nil {
return x.GeneId
}
return ""
}
func (x *VariantAnnotation) GetTranscriptIds() []string {
if x != nil {
return x.TranscriptIds
}
return nil
}
func (x *VariantAnnotation) GetConditions() []*VariantAnnotation_ClinicalCondition {
if x != nil {
return x.Conditions
}
return nil
}
func (x *VariantAnnotation) GetClinicalSignificance() VariantAnnotation_ClinicalSignificance {
if x != nil {
return x.ClinicalSignificance
}
return VariantAnnotation_CLINICAL_SIGNIFICANCE_UNSPECIFIED
}
// A transcript represents the assertion that a particular region of the
// reference genome may be transcribed as RNA.
type Transcript struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The annotation ID of the gene from which this transcript is transcribed.
GeneId string `protobuf:"bytes,1,opt,name=gene_id,json=geneId,proto3" json:"gene_id,omitempty"`
// The <a href="http://en.wikipedia.org/wiki/Exon">exons</a> that compose
// this transcript. This field should be unset for genomes where transcript
// splicing does not occur, for example prokaryotes.
//
// Introns are regions of the transcript that are not included in the
// spliced RNA product. Though not explicitly modeled here, intron ranges can
// be deduced; all regions of this transcript that are not exons are introns.
//
// Exonic sequences do not necessarily code for a translational product
// (amino acids). Only the regions of exons bounded by the
// [codingSequence][google.genomics.v1.Transcript.coding_sequence] correspond
// to coding DNA sequence.
//
// Exons are ordered by start position and may not overlap.
Exons []*Transcript_Exon `protobuf:"bytes,2,rep,name=exons,proto3" json:"exons,omitempty"`
// The range of the coding sequence for this transcript, if any. To determine
// the exact ranges of coding sequence, intersect this range with those of the
// [exons][google.genomics.v1.Transcript.exons], if any. If there are any
// [exons][google.genomics.v1.Transcript.exons], the
// [codingSequence][google.genomics.v1.Transcript.coding_sequence] must start
// and end within them.
//
// Note that in some cases, the reference genome will not exactly match the
// observed mRNA transcript e.g. due to variance in the source genome from
// reference. In these cases,
// [exon.frame][google.genomics.v1.Transcript.Exon.frame] will not necessarily
// match the expected reference reading frame and coding exon reference bases
// cannot necessarily be concatenated to produce the original transcript mRNA.
CodingSequence *Transcript_CodingSequence `protobuf:"bytes,3,opt,name=coding_sequence,json=codingSequence,proto3" json:"coding_sequence,omitempty"`
}
func (x *Transcript) Reset() {
*x = Transcript{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[3]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *Transcript) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*Transcript) ProtoMessage() {}
func (x *Transcript) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[3]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use Transcript.ProtoReflect.Descriptor instead.
func (*Transcript) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{3}
}
func (x *Transcript) GetGeneId() string {
if x != nil {
return x.GeneId
}
return ""
}
func (x *Transcript) GetExons() []*Transcript_Exon {
if x != nil {
return x.Exons
}
return nil
}
func (x *Transcript) GetCodingSequence() *Transcript_CodingSequence {
if x != nil {
return x.CodingSequence
}
return nil
}
type ExternalId struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The name of the source of this data.
SourceName string `protobuf:"bytes,1,opt,name=source_name,json=sourceName,proto3" json:"source_name,omitempty"`
// The id used by the source of this data.
Id string `protobuf:"bytes,2,opt,name=id,proto3" json:"id,omitempty"`
}
func (x *ExternalId) Reset() {
*x = ExternalId{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[4]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *ExternalId) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*ExternalId) ProtoMessage() {}
func (x *ExternalId) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[4]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use ExternalId.ProtoReflect.Descriptor instead.
func (*ExternalId) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{4}
}
func (x *ExternalId) GetSourceName() string {
if x != nil {
return x.SourceName
}
return ""
}
func (x *ExternalId) GetId() string {
if x != nil {
return x.Id
}
return ""
}
type CreateAnnotationSetRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The annotation set to create.
AnnotationSet *AnnotationSet `protobuf:"bytes,1,opt,name=annotation_set,json=annotationSet,proto3" json:"annotation_set,omitempty"`
}
func (x *CreateAnnotationSetRequest) Reset() {
*x = CreateAnnotationSetRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[5]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *CreateAnnotationSetRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*CreateAnnotationSetRequest) ProtoMessage() {}
func (x *CreateAnnotationSetRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[5]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use CreateAnnotationSetRequest.ProtoReflect.Descriptor instead.
func (*CreateAnnotationSetRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{5}
}
func (x *CreateAnnotationSetRequest) GetAnnotationSet() *AnnotationSet {
if x != nil {
return x.AnnotationSet
}
return nil
}
type GetAnnotationSetRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The ID of the annotation set to be retrieved.
AnnotationSetId string `protobuf:"bytes,1,opt,name=annotation_set_id,json=annotationSetId,proto3" json:"annotation_set_id,omitempty"`
}
func (x *GetAnnotationSetRequest) Reset() {
*x = GetAnnotationSetRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[6]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *GetAnnotationSetRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*GetAnnotationSetRequest) ProtoMessage() {}
func (x *GetAnnotationSetRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[6]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use GetAnnotationSetRequest.ProtoReflect.Descriptor instead.
func (*GetAnnotationSetRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{6}
}
func (x *GetAnnotationSetRequest) GetAnnotationSetId() string {
if x != nil {
return x.AnnotationSetId
}
return ""
}
type UpdateAnnotationSetRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The ID of the annotation set to be updated.
AnnotationSetId string `protobuf:"bytes,1,opt,name=annotation_set_id,json=annotationSetId,proto3" json:"annotation_set_id,omitempty"`
// The new annotation set.
AnnotationSet *AnnotationSet `protobuf:"bytes,2,opt,name=annotation_set,json=annotationSet,proto3" json:"annotation_set,omitempty"`
// An optional mask specifying which fields to update. Mutable fields are
// [name][google.genomics.v1.AnnotationSet.name],
// [source_uri][google.genomics.v1.AnnotationSet.source_uri], and
// [info][google.genomics.v1.AnnotationSet.info]. If unspecified, all
// mutable fields will be updated.
UpdateMask *field_mask.FieldMask `protobuf:"bytes,3,opt,name=update_mask,json=updateMask,proto3" json:"update_mask,omitempty"`
}
func (x *UpdateAnnotationSetRequest) Reset() {
*x = UpdateAnnotationSetRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[7]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *UpdateAnnotationSetRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*UpdateAnnotationSetRequest) ProtoMessage() {}
func (x *UpdateAnnotationSetRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[7]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use UpdateAnnotationSetRequest.ProtoReflect.Descriptor instead.
func (*UpdateAnnotationSetRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{7}
}
func (x *UpdateAnnotationSetRequest) GetAnnotationSetId() string {
if x != nil {
return x.AnnotationSetId
}
return ""
}
func (x *UpdateAnnotationSetRequest) GetAnnotationSet() *AnnotationSet {
if x != nil {
return x.AnnotationSet
}
return nil
}
func (x *UpdateAnnotationSetRequest) GetUpdateMask() *field_mask.FieldMask {
if x != nil {
return x.UpdateMask
}
return nil
}
type DeleteAnnotationSetRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The ID of the annotation set to be deleted.
AnnotationSetId string `protobuf:"bytes,1,opt,name=annotation_set_id,json=annotationSetId,proto3" json:"annotation_set_id,omitempty"`
}
func (x *DeleteAnnotationSetRequest) Reset() {
*x = DeleteAnnotationSetRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[8]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *DeleteAnnotationSetRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*DeleteAnnotationSetRequest) ProtoMessage() {}
func (x *DeleteAnnotationSetRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[8]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use DeleteAnnotationSetRequest.ProtoReflect.Descriptor instead.
func (*DeleteAnnotationSetRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{8}
}
func (x *DeleteAnnotationSetRequest) GetAnnotationSetId() string {
if x != nil {
return x.AnnotationSetId
}
return ""
}
type SearchAnnotationSetsRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// Required. The dataset IDs to search within. Caller must have `READ` access
// to these datasets.
DatasetIds []string `protobuf:"bytes,1,rep,name=dataset_ids,json=datasetIds,proto3" json:"dataset_ids,omitempty"`
// If specified, only annotation sets associated with the given reference set
// are returned.
ReferenceSetId string `protobuf:"bytes,2,opt,name=reference_set_id,json=referenceSetId,proto3" json:"reference_set_id,omitempty"`
// Only return annotations sets for which a substring of the name matches this
// string (case insensitive).
Name string `protobuf:"bytes,3,opt,name=name,proto3" json:"name,omitempty"`
// If specified, only annotation sets that have any of these types are
// returned.
Types []AnnotationType `protobuf:"varint,4,rep,packed,name=types,proto3,enum=google.genomics.v1.AnnotationType" json:"types,omitempty"`
// The continuation token, which is used to page through large result sets.
// To get the next page of results, set this parameter to the value of
// `nextPageToken` from the previous response.
PageToken string `protobuf:"bytes,5,opt,name=page_token,json=pageToken,proto3" json:"page_token,omitempty"`
// The maximum number of results to return in a single page. If unspecified,
// defaults to 128. The maximum value is 1024.
PageSize int32 `protobuf:"varint,6,opt,name=page_size,json=pageSize,proto3" json:"page_size,omitempty"`
}
func (x *SearchAnnotationSetsRequest) Reset() {
*x = SearchAnnotationSetsRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[9]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *SearchAnnotationSetsRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*SearchAnnotationSetsRequest) ProtoMessage() {}
func (x *SearchAnnotationSetsRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[9]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use SearchAnnotationSetsRequest.ProtoReflect.Descriptor instead.
func (*SearchAnnotationSetsRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{9}
}
func (x *SearchAnnotationSetsRequest) GetDatasetIds() []string {
if x != nil {
return x.DatasetIds
}
return nil
}
func (x *SearchAnnotationSetsRequest) GetReferenceSetId() string {
if x != nil {
return x.ReferenceSetId
}
return ""
}
func (x *SearchAnnotationSetsRequest) GetName() string {
if x != nil {
return x.Name
}
return ""
}
func (x *SearchAnnotationSetsRequest) GetTypes() []AnnotationType {
if x != nil {
return x.Types
}
return nil
}
func (x *SearchAnnotationSetsRequest) GetPageToken() string {
if x != nil {
return x.PageToken
}
return ""
}
func (x *SearchAnnotationSetsRequest) GetPageSize() int32 {
if x != nil {
return x.PageSize
}
return 0
}
type SearchAnnotationSetsResponse struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The matching annotation sets.
AnnotationSets []*AnnotationSet `protobuf:"bytes,1,rep,name=annotation_sets,json=annotationSets,proto3" json:"annotation_sets,omitempty"`
// The continuation token, which is used to page through large result sets.
// Provide this value in a subsequent request to return the next page of
// results. This field will be empty if there aren't any additional results.
NextPageToken string `protobuf:"bytes,2,opt,name=next_page_token,json=nextPageToken,proto3" json:"next_page_token,omitempty"`
}
func (x *SearchAnnotationSetsResponse) Reset() {
*x = SearchAnnotationSetsResponse{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[10]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *SearchAnnotationSetsResponse) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*SearchAnnotationSetsResponse) ProtoMessage() {}
func (x *SearchAnnotationSetsResponse) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[10]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use SearchAnnotationSetsResponse.ProtoReflect.Descriptor instead.
func (*SearchAnnotationSetsResponse) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{10}
}
func (x *SearchAnnotationSetsResponse) GetAnnotationSets() []*AnnotationSet {
if x != nil {
return x.AnnotationSets
}
return nil
}
func (x *SearchAnnotationSetsResponse) GetNextPageToken() string {
if x != nil {
return x.NextPageToken
}
return ""
}
type CreateAnnotationRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The annotation to be created.
Annotation *Annotation `protobuf:"bytes,1,opt,name=annotation,proto3" json:"annotation,omitempty"`
}
func (x *CreateAnnotationRequest) Reset() {
*x = CreateAnnotationRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[11]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *CreateAnnotationRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*CreateAnnotationRequest) ProtoMessage() {}
func (x *CreateAnnotationRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[11]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use CreateAnnotationRequest.ProtoReflect.Descriptor instead.
func (*CreateAnnotationRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{11}
}
func (x *CreateAnnotationRequest) GetAnnotation() *Annotation {
if x != nil {
return x.Annotation
}
return nil
}
type BatchCreateAnnotationsRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The annotations to be created. At most 4096 can be specified in a single
// request.
Annotations []*Annotation `protobuf:"bytes,1,rep,name=annotations,proto3" json:"annotations,omitempty"`
// A unique request ID which enables the server to detect duplicated requests.
// If provided, duplicated requests will result in the same response; if not
// provided, duplicated requests may result in duplicated data. For a given
// annotation set, callers should not reuse `request_id`s when writing
// different batches of annotations - behavior in this case is undefined.
// A common approach is to use a UUID. For batch jobs where worker crashes are
// a possibility, consider using some unique variant of a worker or run ID.
RequestId string `protobuf:"bytes,2,opt,name=request_id,json=requestId,proto3" json:"request_id,omitempty"`
}
func (x *BatchCreateAnnotationsRequest) Reset() {
*x = BatchCreateAnnotationsRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[12]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *BatchCreateAnnotationsRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*BatchCreateAnnotationsRequest) ProtoMessage() {}
func (x *BatchCreateAnnotationsRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[12]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use BatchCreateAnnotationsRequest.ProtoReflect.Descriptor instead.
func (*BatchCreateAnnotationsRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{12}
}
func (x *BatchCreateAnnotationsRequest) GetAnnotations() []*Annotation {
if x != nil {
return x.Annotations
}
return nil
}
func (x *BatchCreateAnnotationsRequest) GetRequestId() string {
if x != nil {
return x.RequestId
}
return ""
}
type BatchCreateAnnotationsResponse struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The resulting per-annotation entries, ordered consistently with the
// original request.
Entries []*BatchCreateAnnotationsResponse_Entry `protobuf:"bytes,1,rep,name=entries,proto3" json:"entries,omitempty"`
}
func (x *BatchCreateAnnotationsResponse) Reset() {
*x = BatchCreateAnnotationsResponse{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[13]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *BatchCreateAnnotationsResponse) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*BatchCreateAnnotationsResponse) ProtoMessage() {}
func (x *BatchCreateAnnotationsResponse) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[13]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use BatchCreateAnnotationsResponse.ProtoReflect.Descriptor instead.
func (*BatchCreateAnnotationsResponse) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{13}
}
func (x *BatchCreateAnnotationsResponse) GetEntries() []*BatchCreateAnnotationsResponse_Entry {
if x != nil {
return x.Entries
}
return nil
}
type GetAnnotationRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The ID of the annotation to be retrieved.
AnnotationId string `protobuf:"bytes,1,opt,name=annotation_id,json=annotationId,proto3" json:"annotation_id,omitempty"`
}
func (x *GetAnnotationRequest) Reset() {
*x = GetAnnotationRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[14]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *GetAnnotationRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*GetAnnotationRequest) ProtoMessage() {}
func (x *GetAnnotationRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[14]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use GetAnnotationRequest.ProtoReflect.Descriptor instead.
func (*GetAnnotationRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{14}
}
func (x *GetAnnotationRequest) GetAnnotationId() string {
if x != nil {
return x.AnnotationId
}
return ""
}
type UpdateAnnotationRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The ID of the annotation to be updated.
AnnotationId string `protobuf:"bytes,1,opt,name=annotation_id,json=annotationId,proto3" json:"annotation_id,omitempty"`
// The new annotation.
Annotation *Annotation `protobuf:"bytes,2,opt,name=annotation,proto3" json:"annotation,omitempty"`
// An optional mask specifying which fields to update. Mutable fields are
// [name][google.genomics.v1.Annotation.name],
// [variant][google.genomics.v1.Annotation.variant],
// [transcript][google.genomics.v1.Annotation.transcript], and
// [info][google.genomics.v1.Annotation.info]. If unspecified, all mutable
// fields will be updated.
UpdateMask *field_mask.FieldMask `protobuf:"bytes,3,opt,name=update_mask,json=updateMask,proto3" json:"update_mask,omitempty"`
}
func (x *UpdateAnnotationRequest) Reset() {
*x = UpdateAnnotationRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[15]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *UpdateAnnotationRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*UpdateAnnotationRequest) ProtoMessage() {}
func (x *UpdateAnnotationRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[15]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use UpdateAnnotationRequest.ProtoReflect.Descriptor instead.
func (*UpdateAnnotationRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{15}
}
func (x *UpdateAnnotationRequest) GetAnnotationId() string {
if x != nil {
return x.AnnotationId
}
return ""
}
func (x *UpdateAnnotationRequest) GetAnnotation() *Annotation {
if x != nil {
return x.Annotation
}
return nil
}
func (x *UpdateAnnotationRequest) GetUpdateMask() *field_mask.FieldMask {
if x != nil {
return x.UpdateMask
}
return nil
}
type DeleteAnnotationRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The ID of the annotation to be deleted.
AnnotationId string `protobuf:"bytes,1,opt,name=annotation_id,json=annotationId,proto3" json:"annotation_id,omitempty"`
}
func (x *DeleteAnnotationRequest) Reset() {
*x = DeleteAnnotationRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[16]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *DeleteAnnotationRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*DeleteAnnotationRequest) ProtoMessage() {}
func (x *DeleteAnnotationRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[16]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use DeleteAnnotationRequest.ProtoReflect.Descriptor instead.
func (*DeleteAnnotationRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{16}
}
func (x *DeleteAnnotationRequest) GetAnnotationId() string {
if x != nil {
return x.AnnotationId
}
return ""
}
type SearchAnnotationsRequest struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// Required. The annotation sets to search within. The caller must have
// `READ` access to these annotation sets.
// All queried annotation sets must have the same type.
AnnotationSetIds []string `protobuf:"bytes,1,rep,name=annotation_set_ids,json=annotationSetIds,proto3" json:"annotation_set_ids,omitempty"`
// Required. `reference_id` or `reference_name` must be set.
//
// Types that are assignable to Reference:
// *SearchAnnotationsRequest_ReferenceId
// *SearchAnnotationsRequest_ReferenceName
Reference isSearchAnnotationsRequest_Reference `protobuf_oneof:"reference"`
// The start position of the range on the reference, 0-based inclusive. If
// specified,
// [referenceId][google.genomics.v1.SearchAnnotationsRequest.reference_id] or
// [referenceName][google.genomics.v1.SearchAnnotationsRequest.reference_name]
// must be specified. Defaults to 0.
Start int64 `protobuf:"varint,4,opt,name=start,proto3" json:"start,omitempty"`
// The end position of the range on the reference, 0-based exclusive. If
// [referenceId][google.genomics.v1.SearchAnnotationsRequest.reference_id] or
// [referenceName][google.genomics.v1.SearchAnnotationsRequest.reference_name]
// must be specified, Defaults to the length of the reference.
End int64 `protobuf:"varint,5,opt,name=end,proto3" json:"end,omitempty"`
// The continuation token, which is used to page through large result sets.
// To get the next page of results, set this parameter to the value of
// `nextPageToken` from the previous response.
PageToken string `protobuf:"bytes,6,opt,name=page_token,json=pageToken,proto3" json:"page_token,omitempty"`
// The maximum number of results to return in a single page. If unspecified,
// defaults to 256. The maximum value is 2048.
PageSize int32 `protobuf:"varint,7,opt,name=page_size,json=pageSize,proto3" json:"page_size,omitempty"`
}
func (x *SearchAnnotationsRequest) Reset() {
*x = SearchAnnotationsRequest{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[17]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *SearchAnnotationsRequest) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*SearchAnnotationsRequest) ProtoMessage() {}
func (x *SearchAnnotationsRequest) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[17]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use SearchAnnotationsRequest.ProtoReflect.Descriptor instead.
func (*SearchAnnotationsRequest) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{17}
}
func (x *SearchAnnotationsRequest) GetAnnotationSetIds() []string {
if x != nil {
return x.AnnotationSetIds
}
return nil
}
func (m *SearchAnnotationsRequest) GetReference() isSearchAnnotationsRequest_Reference {
if m != nil {
return m.Reference
}
return nil
}
func (x *SearchAnnotationsRequest) GetReferenceId() string {
if x, ok := x.GetReference().(*SearchAnnotationsRequest_ReferenceId); ok {
return x.ReferenceId
}
return ""
}
func (x *SearchAnnotationsRequest) GetReferenceName() string {
if x, ok := x.GetReference().(*SearchAnnotationsRequest_ReferenceName); ok {
return x.ReferenceName
}
return ""
}
func (x *SearchAnnotationsRequest) GetStart() int64 {
if x != nil {
return x.Start
}
return 0
}
func (x *SearchAnnotationsRequest) GetEnd() int64 {
if x != nil {
return x.End
}
return 0
}
func (x *SearchAnnotationsRequest) GetPageToken() string {
if x != nil {
return x.PageToken
}
return ""
}
func (x *SearchAnnotationsRequest) GetPageSize() int32 {
if x != nil {
return x.PageSize
}
return 0
}
type isSearchAnnotationsRequest_Reference interface {
isSearchAnnotationsRequest_Reference()
}
type SearchAnnotationsRequest_ReferenceId struct {
// The ID of the reference to query.
ReferenceId string `protobuf:"bytes,2,opt,name=reference_id,json=referenceId,proto3,oneof"`
}
type SearchAnnotationsRequest_ReferenceName struct {
// The name of the reference to query, within the reference set associated
// with this query.
ReferenceName string `protobuf:"bytes,3,opt,name=reference_name,json=referenceName,proto3,oneof"`
}
func (*SearchAnnotationsRequest_ReferenceId) isSearchAnnotationsRequest_Reference() {}
func (*SearchAnnotationsRequest_ReferenceName) isSearchAnnotationsRequest_Reference() {}
type SearchAnnotationsResponse struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The matching annotations.
Annotations []*Annotation `protobuf:"bytes,1,rep,name=annotations,proto3" json:"annotations,omitempty"`
// The continuation token, which is used to page through large result sets.
// Provide this value in a subsequent request to return the next page of
// results. This field will be empty if there aren't any additional results.
NextPageToken string `protobuf:"bytes,2,opt,name=next_page_token,json=nextPageToken,proto3" json:"next_page_token,omitempty"`
}
func (x *SearchAnnotationsResponse) Reset() {
*x = SearchAnnotationsResponse{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[18]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *SearchAnnotationsResponse) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*SearchAnnotationsResponse) ProtoMessage() {}
func (x *SearchAnnotationsResponse) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[18]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use SearchAnnotationsResponse.ProtoReflect.Descriptor instead.
func (*SearchAnnotationsResponse) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{18}
}
func (x *SearchAnnotationsResponse) GetAnnotations() []*Annotation {
if x != nil {
return x.Annotations
}
return nil
}
func (x *SearchAnnotationsResponse) GetNextPageToken() string {
if x != nil {
return x.NextPageToken
}
return ""
}
type VariantAnnotation_ClinicalCondition struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// A set of names for the condition.
Names []string `protobuf:"bytes,1,rep,name=names,proto3" json:"names,omitempty"`
// The set of external IDs for this condition.
ExternalIds []*ExternalId `protobuf:"bytes,2,rep,name=external_ids,json=externalIds,proto3" json:"external_ids,omitempty"`
// The MedGen concept id associated with this gene.
// Search for these IDs at http://www.ncbi.nlm.nih.gov/medgen/
ConceptId string `protobuf:"bytes,3,opt,name=concept_id,json=conceptId,proto3" json:"concept_id,omitempty"`
// The OMIM id for this condition.
// Search for these IDs at http://omim.org/
OmimId string `protobuf:"bytes,4,opt,name=omim_id,json=omimId,proto3" json:"omim_id,omitempty"`
}
func (x *VariantAnnotation_ClinicalCondition) Reset() {
*x = VariantAnnotation_ClinicalCondition{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[21]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *VariantAnnotation_ClinicalCondition) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*VariantAnnotation_ClinicalCondition) ProtoMessage() {}
func (x *VariantAnnotation_ClinicalCondition) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[21]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use VariantAnnotation_ClinicalCondition.ProtoReflect.Descriptor instead.
func (*VariantAnnotation_ClinicalCondition) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{2, 0}
}
func (x *VariantAnnotation_ClinicalCondition) GetNames() []string {
if x != nil {
return x.Names
}
return nil
}
func (x *VariantAnnotation_ClinicalCondition) GetExternalIds() []*ExternalId {
if x != nil {
return x.ExternalIds
}
return nil
}
func (x *VariantAnnotation_ClinicalCondition) GetConceptId() string {
if x != nil {
return x.ConceptId
}
return ""
}
func (x *VariantAnnotation_ClinicalCondition) GetOmimId() string {
if x != nil {
return x.OmimId
}
return ""
}
type Transcript_Exon struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The start position of the exon on this annotation's reference sequence,
// 0-based inclusive. Note that this is relative to the reference start, and
// **not** the containing annotation start.
Start int64 `protobuf:"varint,1,opt,name=start,proto3" json:"start,omitempty"`
// The end position of the exon on this annotation's reference sequence,
// 0-based exclusive. Note that this is relative to the reference start, and
// *not* the containing annotation start.
End int64 `protobuf:"varint,2,opt,name=end,proto3" json:"end,omitempty"`
// The frame of this exon. Contains a value of 0, 1, or 2, which indicates
// the offset of the first coding base of the exon within the reading frame
// of the coding DNA sequence, if any. This field is dependent on the
// strandedness of this annotation (see
// [Annotation.reverse_strand][google.genomics.v1.Annotation.reverse_strand]).
// For forward stranded annotations, this offset is relative to the
// [exon.start][google.genomics.v1.Transcript.Exon.start]. For reverse
// strand annotations, this offset is relative to the
// [exon.end][google.genomics.v1.Transcript.Exon.end] `- 1`.
//
// Unset if this exon does not intersect the coding sequence. Upon creation
// of a transcript, the frame must be populated for all or none of the
// coding exons.
Frame *wrappers.Int32Value `protobuf:"bytes,3,opt,name=frame,proto3" json:"frame,omitempty"`
}
func (x *Transcript_Exon) Reset() {
*x = Transcript_Exon{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[22]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *Transcript_Exon) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*Transcript_Exon) ProtoMessage() {}
func (x *Transcript_Exon) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[22]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use Transcript_Exon.ProtoReflect.Descriptor instead.
func (*Transcript_Exon) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{3, 0}
}
func (x *Transcript_Exon) GetStart() int64 {
if x != nil {
return x.Start
}
return 0
}
func (x *Transcript_Exon) GetEnd() int64 {
if x != nil {
return x.End
}
return 0
}
func (x *Transcript_Exon) GetFrame() *wrappers.Int32Value {
if x != nil {
return x.Frame
}
return nil
}
type Transcript_CodingSequence struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The start of the coding sequence on this annotation's reference sequence,
// 0-based inclusive. Note that this position is relative to the reference
// start, and *not* the containing annotation start.
Start int64 `protobuf:"varint,1,opt,name=start,proto3" json:"start,omitempty"`
// The end of the coding sequence on this annotation's reference sequence,
// 0-based exclusive. Note that this position is relative to the reference
// start, and *not* the containing annotation start.
End int64 `protobuf:"varint,2,opt,name=end,proto3" json:"end,omitempty"`
}
func (x *Transcript_CodingSequence) Reset() {
*x = Transcript_CodingSequence{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[23]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *Transcript_CodingSequence) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*Transcript_CodingSequence) ProtoMessage() {}
func (x *Transcript_CodingSequence) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[23]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use Transcript_CodingSequence.ProtoReflect.Descriptor instead.
func (*Transcript_CodingSequence) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{3, 1}
}
func (x *Transcript_CodingSequence) GetStart() int64 {
if x != nil {
return x.Start
}
return 0
}
func (x *Transcript_CodingSequence) GetEnd() int64 {
if x != nil {
return x.End
}
return 0
}
type BatchCreateAnnotationsResponse_Entry struct {
state protoimpl.MessageState
sizeCache protoimpl.SizeCache
unknownFields protoimpl.UnknownFields
// The creation status.
Status *status.Status `protobuf:"bytes,1,opt,name=status,proto3" json:"status,omitempty"`
// The created annotation, if creation was successful.
Annotation *Annotation `protobuf:"bytes,2,opt,name=annotation,proto3" json:"annotation,omitempty"`
}
func (x *BatchCreateAnnotationsResponse_Entry) Reset() {
*x = BatchCreateAnnotationsResponse_Entry{}
if protoimpl.UnsafeEnabled {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[24]
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
ms.StoreMessageInfo(mi)
}
}
func (x *BatchCreateAnnotationsResponse_Entry) String() string {
return protoimpl.X.MessageStringOf(x)
}
func (*BatchCreateAnnotationsResponse_Entry) ProtoMessage() {}
func (x *BatchCreateAnnotationsResponse_Entry) ProtoReflect() protoreflect.Message {
mi := &file_google_genomics_v1_annotations_proto_msgTypes[24]
if protoimpl.UnsafeEnabled && x != nil {
ms := protoimpl.X.MessageStateOf(protoimpl.Pointer(x))
if ms.LoadMessageInfo() == nil {
ms.StoreMessageInfo(mi)
}
return ms
}
return mi.MessageOf(x)
}
// Deprecated: Use BatchCreateAnnotationsResponse_Entry.ProtoReflect.Descriptor instead.
func (*BatchCreateAnnotationsResponse_Entry) Descriptor() ([]byte, []int) {
return file_google_genomics_v1_annotations_proto_rawDescGZIP(), []int{13, 0}
}
func (x *BatchCreateAnnotationsResponse_Entry) GetStatus() *status.Status {
if x != nil {
return x.Status
}
return nil
}
func (x *BatchCreateAnnotationsResponse_Entry) GetAnnotation() *Annotation {
if x != nil {
return x.Annotation
}
return nil
}
var File_google_genomics_v1_annotations_proto protoreflect.FileDescriptor
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}
var (
file_google_genomics_v1_annotations_proto_rawDescOnce sync.Once
file_google_genomics_v1_annotations_proto_rawDescData = file_google_genomics_v1_annotations_proto_rawDesc
)
func file_google_genomics_v1_annotations_proto_rawDescGZIP() []byte {
file_google_genomics_v1_annotations_proto_rawDescOnce.Do(func() {
file_google_genomics_v1_annotations_proto_rawDescData = protoimpl.X.CompressGZIP(file_google_genomics_v1_annotations_proto_rawDescData)
})
return file_google_genomics_v1_annotations_proto_rawDescData
}
var file_google_genomics_v1_annotations_proto_enumTypes = make([]protoimpl.EnumInfo, 4)
var file_google_genomics_v1_annotations_proto_msgTypes = make([]protoimpl.MessageInfo, 25)
var file_google_genomics_v1_annotations_proto_goTypes = []interface{}{
(AnnotationType)(0), // 0: google.genomics.v1.AnnotationType
(VariantAnnotation_Type)(0), // 1: google.genomics.v1.VariantAnnotation.Type
(VariantAnnotation_Effect)(0), // 2: google.genomics.v1.VariantAnnotation.Effect
(VariantAnnotation_ClinicalSignificance)(0), // 3: google.genomics.v1.VariantAnnotation.ClinicalSignificance
(*AnnotationSet)(nil), // 4: google.genomics.v1.AnnotationSet
(*Annotation)(nil), // 5: google.genomics.v1.Annotation
(*VariantAnnotation)(nil), // 6: google.genomics.v1.VariantAnnotation
(*Transcript)(nil), // 7: google.genomics.v1.Transcript
(*ExternalId)(nil), // 8: google.genomics.v1.ExternalId
(*CreateAnnotationSetRequest)(nil), // 9: google.genomics.v1.CreateAnnotationSetRequest
(*GetAnnotationSetRequest)(nil), // 10: google.genomics.v1.GetAnnotationSetRequest
(*UpdateAnnotationSetRequest)(nil), // 11: google.genomics.v1.UpdateAnnotationSetRequest
(*DeleteAnnotationSetRequest)(nil), // 12: google.genomics.v1.DeleteAnnotationSetRequest
(*SearchAnnotationSetsRequest)(nil), // 13: google.genomics.v1.SearchAnnotationSetsRequest
(*SearchAnnotationSetsResponse)(nil), // 14: google.genomics.v1.SearchAnnotationSetsResponse
(*CreateAnnotationRequest)(nil), // 15: google.genomics.v1.CreateAnnotationRequest
(*BatchCreateAnnotationsRequest)(nil), // 16: google.genomics.v1.BatchCreateAnnotationsRequest
(*BatchCreateAnnotationsResponse)(nil), // 17: google.genomics.v1.BatchCreateAnnotationsResponse
(*GetAnnotationRequest)(nil), // 18: google.genomics.v1.GetAnnotationRequest
(*UpdateAnnotationRequest)(nil), // 19: google.genomics.v1.UpdateAnnotationRequest
(*DeleteAnnotationRequest)(nil), // 20: google.genomics.v1.DeleteAnnotationRequest
(*SearchAnnotationsRequest)(nil), // 21: google.genomics.v1.SearchAnnotationsRequest
(*SearchAnnotationsResponse)(nil), // 22: google.genomics.v1.SearchAnnotationsResponse
nil, // 23: google.genomics.v1.AnnotationSet.InfoEntry
nil, // 24: google.genomics.v1.Annotation.InfoEntry
(*VariantAnnotation_ClinicalCondition)(nil), // 25: google.genomics.v1.VariantAnnotation.ClinicalCondition
(*Transcript_Exon)(nil), // 26: google.genomics.v1.Transcript.Exon
(*Transcript_CodingSequence)(nil), // 27: google.genomics.v1.Transcript.CodingSequence
(*BatchCreateAnnotationsResponse_Entry)(nil), // 28: google.genomics.v1.BatchCreateAnnotationsResponse.Entry
(*field_mask.FieldMask)(nil), // 29: google.protobuf.FieldMask
(*_struct.ListValue)(nil), // 30: google.protobuf.ListValue
(*wrappers.Int32Value)(nil), // 31: google.protobuf.Int32Value
(*status.Status)(nil), // 32: google.rpc.Status
(*empty.Empty)(nil), // 33: google.protobuf.Empty
}
var file_google_genomics_v1_annotations_proto_depIdxs = []int32{
0, // 0: google.genomics.v1.AnnotationSet.type:type_name -> google.genomics.v1.AnnotationType
23, // 1: google.genomics.v1.AnnotationSet.info:type_name -> google.genomics.v1.AnnotationSet.InfoEntry
0, // 2: google.genomics.v1.Annotation.type:type_name -> google.genomics.v1.AnnotationType
6, // 3: google.genomics.v1.Annotation.variant:type_name -> google.genomics.v1.VariantAnnotation
7, // 4: google.genomics.v1.Annotation.transcript:type_name -> google.genomics.v1.Transcript
24, // 5: google.genomics.v1.Annotation.info:type_name -> google.genomics.v1.Annotation.InfoEntry
1, // 6: google.genomics.v1.VariantAnnotation.type:type_name -> google.genomics.v1.VariantAnnotation.Type
2, // 7: google.genomics.v1.VariantAnnotation.effect:type_name -> google.genomics.v1.VariantAnnotation.Effect
25, // 8: google.genomics.v1.VariantAnnotation.conditions:type_name -> google.genomics.v1.VariantAnnotation.ClinicalCondition
3, // 9: google.genomics.v1.VariantAnnotation.clinical_significance:type_name -> google.genomics.v1.VariantAnnotation.ClinicalSignificance
26, // 10: google.genomics.v1.Transcript.exons:type_name -> google.genomics.v1.Transcript.Exon
27, // 11: google.genomics.v1.Transcript.coding_sequence:type_name -> google.genomics.v1.Transcript.CodingSequence
4, // 12: google.genomics.v1.CreateAnnotationSetRequest.annotation_set:type_name -> google.genomics.v1.AnnotationSet
4, // 13: google.genomics.v1.UpdateAnnotationSetRequest.annotation_set:type_name -> google.genomics.v1.AnnotationSet
29, // 14: google.genomics.v1.UpdateAnnotationSetRequest.update_mask:type_name -> google.protobuf.FieldMask
0, // 15: google.genomics.v1.SearchAnnotationSetsRequest.types:type_name -> google.genomics.v1.AnnotationType
4, // 16: google.genomics.v1.SearchAnnotationSetsResponse.annotation_sets:type_name -> google.genomics.v1.AnnotationSet
5, // 17: google.genomics.v1.CreateAnnotationRequest.annotation:type_name -> google.genomics.v1.Annotation
5, // 18: google.genomics.v1.BatchCreateAnnotationsRequest.annotations:type_name -> google.genomics.v1.Annotation
28, // 19: google.genomics.v1.BatchCreateAnnotationsResponse.entries:type_name -> google.genomics.v1.BatchCreateAnnotationsResponse.Entry
5, // 20: google.genomics.v1.UpdateAnnotationRequest.annotation:type_name -> google.genomics.v1.Annotation
29, // 21: google.genomics.v1.UpdateAnnotationRequest.update_mask:type_name -> google.protobuf.FieldMask
5, // 22: google.genomics.v1.SearchAnnotationsResponse.annotations:type_name -> google.genomics.v1.Annotation
30, // 23: google.genomics.v1.AnnotationSet.InfoEntry.value:type_name -> google.protobuf.ListValue
30, // 24: google.genomics.v1.Annotation.InfoEntry.value:type_name -> google.protobuf.ListValue
8, // 25: google.genomics.v1.VariantAnnotation.ClinicalCondition.external_ids:type_name -> google.genomics.v1.ExternalId
31, // 26: google.genomics.v1.Transcript.Exon.frame:type_name -> google.protobuf.Int32Value
32, // 27: google.genomics.v1.BatchCreateAnnotationsResponse.Entry.status:type_name -> google.rpc.Status
5, // 28: google.genomics.v1.BatchCreateAnnotationsResponse.Entry.annotation:type_name -> google.genomics.v1.Annotation
9, // 29: google.genomics.v1.AnnotationServiceV1.CreateAnnotationSet:input_type -> google.genomics.v1.CreateAnnotationSetRequest
10, // 30: google.genomics.v1.AnnotationServiceV1.GetAnnotationSet:input_type -> google.genomics.v1.GetAnnotationSetRequest
11, // 31: google.genomics.v1.AnnotationServiceV1.UpdateAnnotationSet:input_type -> google.genomics.v1.UpdateAnnotationSetRequest
12, // 32: google.genomics.v1.AnnotationServiceV1.DeleteAnnotationSet:input_type -> google.genomics.v1.DeleteAnnotationSetRequest
13, // 33: google.genomics.v1.AnnotationServiceV1.SearchAnnotationSets:input_type -> google.genomics.v1.SearchAnnotationSetsRequest
15, // 34: google.genomics.v1.AnnotationServiceV1.CreateAnnotation:input_type -> google.genomics.v1.CreateAnnotationRequest
16, // 35: google.genomics.v1.AnnotationServiceV1.BatchCreateAnnotations:input_type -> google.genomics.v1.BatchCreateAnnotationsRequest
18, // 36: google.genomics.v1.AnnotationServiceV1.GetAnnotation:input_type -> google.genomics.v1.GetAnnotationRequest
19, // 37: google.genomics.v1.AnnotationServiceV1.UpdateAnnotation:input_type -> google.genomics.v1.UpdateAnnotationRequest
20, // 38: google.genomics.v1.AnnotationServiceV1.DeleteAnnotation:input_type -> google.genomics.v1.DeleteAnnotationRequest
21, // 39: google.genomics.v1.AnnotationServiceV1.SearchAnnotations:input_type -> google.genomics.v1.SearchAnnotationsRequest
4, // 40: google.genomics.v1.AnnotationServiceV1.CreateAnnotationSet:output_type -> google.genomics.v1.AnnotationSet
4, // 41: google.genomics.v1.AnnotationServiceV1.GetAnnotationSet:output_type -> google.genomics.v1.AnnotationSet
4, // 42: google.genomics.v1.AnnotationServiceV1.UpdateAnnotationSet:output_type -> google.genomics.v1.AnnotationSet
33, // 43: google.genomics.v1.AnnotationServiceV1.DeleteAnnotationSet:output_type -> google.protobuf.Empty
14, // 44: google.genomics.v1.AnnotationServiceV1.SearchAnnotationSets:output_type -> google.genomics.v1.SearchAnnotationSetsResponse
5, // 45: google.genomics.v1.AnnotationServiceV1.CreateAnnotation:output_type -> google.genomics.v1.Annotation
17, // 46: google.genomics.v1.AnnotationServiceV1.BatchCreateAnnotations:output_type -> google.genomics.v1.BatchCreateAnnotationsResponse
5, // 47: google.genomics.v1.AnnotationServiceV1.GetAnnotation:output_type -> google.genomics.v1.Annotation
5, // 48: google.genomics.v1.AnnotationServiceV1.UpdateAnnotation:output_type -> google.genomics.v1.Annotation
33, // 49: google.genomics.v1.AnnotationServiceV1.DeleteAnnotation:output_type -> google.protobuf.Empty
22, // 50: google.genomics.v1.AnnotationServiceV1.SearchAnnotations:output_type -> google.genomics.v1.SearchAnnotationsResponse
40, // [40:51] is the sub-list for method output_type
29, // [29:40] is the sub-list for method input_type
29, // [29:29] is the sub-list for extension type_name
29, // [29:29] is the sub-list for extension extendee
0, // [0:29] is the sub-list for field type_name
}
func init() { file_google_genomics_v1_annotations_proto_init() }
func file_google_genomics_v1_annotations_proto_init() {
if File_google_genomics_v1_annotations_proto != nil {
return
}
if !protoimpl.UnsafeEnabled {
file_google_genomics_v1_annotations_proto_msgTypes[0].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*AnnotationSet); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[1].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*Annotation); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[2].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*VariantAnnotation); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[3].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*Transcript); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[4].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*ExternalId); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[5].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*CreateAnnotationSetRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[6].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*GetAnnotationSetRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[7].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*UpdateAnnotationSetRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[8].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*DeleteAnnotationSetRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[9].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*SearchAnnotationSetsRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[10].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*SearchAnnotationSetsResponse); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[11].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*CreateAnnotationRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[12].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*BatchCreateAnnotationsRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[13].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*BatchCreateAnnotationsResponse); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[14].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*GetAnnotationRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[15].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*UpdateAnnotationRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[16].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*DeleteAnnotationRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[17].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*SearchAnnotationsRequest); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[18].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*SearchAnnotationsResponse); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[21].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*VariantAnnotation_ClinicalCondition); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[22].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*Transcript_Exon); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[23].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*Transcript_CodingSequence); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
file_google_genomics_v1_annotations_proto_msgTypes[24].Exporter = func(v interface{}, i int) interface{} {
switch v := v.(*BatchCreateAnnotationsResponse_Entry); i {
case 0:
return &v.state
case 1:
return &v.sizeCache
case 2:
return &v.unknownFields
default:
return nil
}
}
}
file_google_genomics_v1_annotations_proto_msgTypes[1].OneofWrappers = []interface{}{
(*Annotation_Variant)(nil),
(*Annotation_Transcript)(nil),
}
file_google_genomics_v1_annotations_proto_msgTypes[17].OneofWrappers = []interface{}{
(*SearchAnnotationsRequest_ReferenceId)(nil),
(*SearchAnnotationsRequest_ReferenceName)(nil),
}
type x struct{}
out := protoimpl.TypeBuilder{
File: protoimpl.DescBuilder{
GoPackagePath: reflect.TypeOf(x{}).PkgPath(),
RawDescriptor: file_google_genomics_v1_annotations_proto_rawDesc,
NumEnums: 4,
NumMessages: 25,
NumExtensions: 0,
NumServices: 1,
},
GoTypes: file_google_genomics_v1_annotations_proto_goTypes,
DependencyIndexes: file_google_genomics_v1_annotations_proto_depIdxs,
EnumInfos: file_google_genomics_v1_annotations_proto_enumTypes,
MessageInfos: file_google_genomics_v1_annotations_proto_msgTypes,
}.Build()
File_google_genomics_v1_annotations_proto = out.File
file_google_genomics_v1_annotations_proto_rawDesc = nil
file_google_genomics_v1_annotations_proto_goTypes = nil
file_google_genomics_v1_annotations_proto_depIdxs = nil
}
// Reference imports to suppress errors if they are not otherwise used.
var _ context.Context
var _ grpc.ClientConnInterface
// This is a compile-time assertion to ensure that this generated file
// is compatible with the grpc package it is being compiled against.
const _ = grpc.SupportPackageIsVersion6
// AnnotationServiceV1Client is the client API for AnnotationServiceV1 service.
//
// For semantics around ctx use and closing/ending streaming RPCs, please refer to https://godoc.org/google.golang.org/grpc#ClientConn.NewStream.
type AnnotationServiceV1Client interface {
// Creates a new annotation set. Caller must have WRITE permission for the
// associated dataset.
//
// The following fields are required:
//
// * [datasetId][google.genomics.v1.AnnotationSet.dataset_id]
// * [referenceSetId][google.genomics.v1.AnnotationSet.reference_set_id]
//
// All other fields may be optionally specified, unless documented as being
// server-generated (for example, the `id` field).
CreateAnnotationSet(ctx context.Context, in *CreateAnnotationSetRequest, opts ...grpc.CallOption) (*AnnotationSet, error)
// Gets an annotation set. Caller must have READ permission for
// the associated dataset.
GetAnnotationSet(ctx context.Context, in *GetAnnotationSetRequest, opts ...grpc.CallOption) (*AnnotationSet, error)
// Updates an annotation set. The update must respect all mutability
// restrictions and other invariants described on the annotation set resource.
// Caller must have WRITE permission for the associated dataset.
UpdateAnnotationSet(ctx context.Context, in *UpdateAnnotationSetRequest, opts ...grpc.CallOption) (*AnnotationSet, error)
// Deletes an annotation set. Caller must have WRITE permission
// for the associated annotation set.
DeleteAnnotationSet(ctx context.Context, in *DeleteAnnotationSetRequest, opts ...grpc.CallOption) (*empty.Empty, error)
// Searches for annotation sets that match the given criteria. Annotation sets
// are returned in an unspecified order. This order is consistent, such that
// two queries for the same content (regardless of page size) yield annotation
// sets in the same order across their respective streams of paginated
// responses. Caller must have READ permission for the queried datasets.
SearchAnnotationSets(ctx context.Context, in *SearchAnnotationSetsRequest, opts ...grpc.CallOption) (*SearchAnnotationSetsResponse, error)
// Creates a new annotation. Caller must have WRITE permission
// for the associated annotation set.
//
// The following fields are required:
//
// * [annotationSetId][google.genomics.v1.Annotation.annotation_set_id]
// * [referenceName][google.genomics.v1.Annotation.reference_name] or
// [referenceId][google.genomics.v1.Annotation.reference_id]
//
// ### Transcripts
//
// For annotations of type TRANSCRIPT, the following fields of
// [transcript][google.genomics.v1.Annotation.transcript] must be provided:
//
// * [exons.start][google.genomics.v1.Transcript.Exon.start]
// * [exons.end][google.genomics.v1.Transcript.Exon.end]
//
// All other fields may be optionally specified, unless documented as being
// server-generated (for example, the `id` field). The annotated
// range must be no longer than 100Mbp (mega base pairs). See the
// [Annotation resource][google.genomics.v1.Annotation]
// for additional restrictions on each field.
CreateAnnotation(ctx context.Context, in *CreateAnnotationRequest, opts ...grpc.CallOption) (*Annotation, error)
// Creates one or more new annotations atomically. All annotations must
// belong to the same annotation set. Caller must have WRITE
// permission for this annotation set. For optimal performance, batch
// positionally adjacent annotations together.
//
// If the request has a systemic issue, such as an attempt to write to
// an inaccessible annotation set, the entire RPC will fail accordingly. For
// lesser data issues, when possible an error will be isolated to the
// corresponding batch entry in the response; the remaining well formed
// annotations will be created normally.
//
// For details on the requirements for each individual annotation resource,
// see
// [CreateAnnotation][google.genomics.v1.AnnotationServiceV1.CreateAnnotation].
BatchCreateAnnotations(ctx context.Context, in *BatchCreateAnnotationsRequest, opts ...grpc.CallOption) (*BatchCreateAnnotationsResponse, error)
// Gets an annotation. Caller must have READ permission
// for the associated annotation set.
GetAnnotation(ctx context.Context, in *GetAnnotationRequest, opts ...grpc.CallOption) (*Annotation, error)
// Updates an annotation. Caller must have
// WRITE permission for the associated dataset.
UpdateAnnotation(ctx context.Context, in *UpdateAnnotationRequest, opts ...grpc.CallOption) (*Annotation, error)
// Deletes an annotation. Caller must have WRITE permission for
// the associated annotation set.
DeleteAnnotation(ctx context.Context, in *DeleteAnnotationRequest, opts ...grpc.CallOption) (*empty.Empty, error)
// Searches for annotations that match the given criteria. Results are
// ordered by genomic coordinate (by reference sequence, then position).
// Annotations with equivalent genomic coordinates are returned in an
// unspecified order. This order is consistent, such that two queries for the
// same content (regardless of page size) yield annotations in the same order
// across their respective streams of paginated responses. Caller must have
// READ permission for the queried annotation sets.
SearchAnnotations(ctx context.Context, in *SearchAnnotationsRequest, opts ...grpc.CallOption) (*SearchAnnotationsResponse, error)
}
type annotationServiceV1Client struct {
cc grpc.ClientConnInterface
}
func NewAnnotationServiceV1Client(cc grpc.ClientConnInterface) AnnotationServiceV1Client {
return &annotationServiceV1Client{cc}
}
func (c *annotationServiceV1Client) CreateAnnotationSet(ctx context.Context, in *CreateAnnotationSetRequest, opts ...grpc.CallOption) (*AnnotationSet, error) {
out := new(AnnotationSet)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/CreateAnnotationSet", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) GetAnnotationSet(ctx context.Context, in *GetAnnotationSetRequest, opts ...grpc.CallOption) (*AnnotationSet, error) {
out := new(AnnotationSet)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/GetAnnotationSet", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) UpdateAnnotationSet(ctx context.Context, in *UpdateAnnotationSetRequest, opts ...grpc.CallOption) (*AnnotationSet, error) {
out := new(AnnotationSet)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/UpdateAnnotationSet", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) DeleteAnnotationSet(ctx context.Context, in *DeleteAnnotationSetRequest, opts ...grpc.CallOption) (*empty.Empty, error) {
out := new(empty.Empty)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/DeleteAnnotationSet", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) SearchAnnotationSets(ctx context.Context, in *SearchAnnotationSetsRequest, opts ...grpc.CallOption) (*SearchAnnotationSetsResponse, error) {
out := new(SearchAnnotationSetsResponse)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/SearchAnnotationSets", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) CreateAnnotation(ctx context.Context, in *CreateAnnotationRequest, opts ...grpc.CallOption) (*Annotation, error) {
out := new(Annotation)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/CreateAnnotation", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) BatchCreateAnnotations(ctx context.Context, in *BatchCreateAnnotationsRequest, opts ...grpc.CallOption) (*BatchCreateAnnotationsResponse, error) {
out := new(BatchCreateAnnotationsResponse)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/BatchCreateAnnotations", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) GetAnnotation(ctx context.Context, in *GetAnnotationRequest, opts ...grpc.CallOption) (*Annotation, error) {
out := new(Annotation)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/GetAnnotation", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) UpdateAnnotation(ctx context.Context, in *UpdateAnnotationRequest, opts ...grpc.CallOption) (*Annotation, error) {
out := new(Annotation)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/UpdateAnnotation", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) DeleteAnnotation(ctx context.Context, in *DeleteAnnotationRequest, opts ...grpc.CallOption) (*empty.Empty, error) {
out := new(empty.Empty)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/DeleteAnnotation", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
func (c *annotationServiceV1Client) SearchAnnotations(ctx context.Context, in *SearchAnnotationsRequest, opts ...grpc.CallOption) (*SearchAnnotationsResponse, error) {
out := new(SearchAnnotationsResponse)
err := c.cc.Invoke(ctx, "/google.genomics.v1.AnnotationServiceV1/SearchAnnotations", in, out, opts...)
if err != nil {
return nil, err
}
return out, nil
}
// AnnotationServiceV1Server is the server API for AnnotationServiceV1 service.
type AnnotationServiceV1Server interface {
// Creates a new annotation set. Caller must have WRITE permission for the
// associated dataset.
//
// The following fields are required:
//
// * [datasetId][google.genomics.v1.AnnotationSet.dataset_id]
// * [referenceSetId][google.genomics.v1.AnnotationSet.reference_set_id]
//
// All other fields may be optionally specified, unless documented as being
// server-generated (for example, the `id` field).
CreateAnnotationSet(context.Context, *CreateAnnotationSetRequest) (*AnnotationSet, error)
// Gets an annotation set. Caller must have READ permission for
// the associated dataset.
GetAnnotationSet(context.Context, *GetAnnotationSetRequest) (*AnnotationSet, error)
// Updates an annotation set. The update must respect all mutability
// restrictions and other invariants described on the annotation set resource.
// Caller must have WRITE permission for the associated dataset.
UpdateAnnotationSet(context.Context, *UpdateAnnotationSetRequest) (*AnnotationSet, error)
// Deletes an annotation set. Caller must have WRITE permission
// for the associated annotation set.
DeleteAnnotationSet(context.Context, *DeleteAnnotationSetRequest) (*empty.Empty, error)
// Searches for annotation sets that match the given criteria. Annotation sets
// are returned in an unspecified order. This order is consistent, such that
// two queries for the same content (regardless of page size) yield annotation
// sets in the same order across their respective streams of paginated
// responses. Caller must have READ permission for the queried datasets.
SearchAnnotationSets(context.Context, *SearchAnnotationSetsRequest) (*SearchAnnotationSetsResponse, error)
// Creates a new annotation. Caller must have WRITE permission
// for the associated annotation set.
//
// The following fields are required:
//
// * [annotationSetId][google.genomics.v1.Annotation.annotation_set_id]
// * [referenceName][google.genomics.v1.Annotation.reference_name] or
// [referenceId][google.genomics.v1.Annotation.reference_id]
//
// ### Transcripts
//
// For annotations of type TRANSCRIPT, the following fields of
// [transcript][google.genomics.v1.Annotation.transcript] must be provided:
//
// * [exons.start][google.genomics.v1.Transcript.Exon.start]
// * [exons.end][google.genomics.v1.Transcript.Exon.end]
//
// All other fields may be optionally specified, unless documented as being
// server-generated (for example, the `id` field). The annotated
// range must be no longer than 100Mbp (mega base pairs). See the
// [Annotation resource][google.genomics.v1.Annotation]
// for additional restrictions on each field.
CreateAnnotation(context.Context, *CreateAnnotationRequest) (*Annotation, error)
// Creates one or more new annotations atomically. All annotations must
// belong to the same annotation set. Caller must have WRITE
// permission for this annotation set. For optimal performance, batch
// positionally adjacent annotations together.
//
// If the request has a systemic issue, such as an attempt to write to
// an inaccessible annotation set, the entire RPC will fail accordingly. For
// lesser data issues, when possible an error will be isolated to the
// corresponding batch entry in the response; the remaining well formed
// annotations will be created normally.
//
// For details on the requirements for each individual annotation resource,
// see
// [CreateAnnotation][google.genomics.v1.AnnotationServiceV1.CreateAnnotation].
BatchCreateAnnotations(context.Context, *BatchCreateAnnotationsRequest) (*BatchCreateAnnotationsResponse, error)
// Gets an annotation. Caller must have READ permission
// for the associated annotation set.
GetAnnotation(context.Context, *GetAnnotationRequest) (*Annotation, error)
// Updates an annotation. Caller must have
// WRITE permission for the associated dataset.
UpdateAnnotation(context.Context, *UpdateAnnotationRequest) (*Annotation, error)
// Deletes an annotation. Caller must have WRITE permission for
// the associated annotation set.
DeleteAnnotation(context.Context, *DeleteAnnotationRequest) (*empty.Empty, error)
// Searches for annotations that match the given criteria. Results are
// ordered by genomic coordinate (by reference sequence, then position).
// Annotations with equivalent genomic coordinates are returned in an
// unspecified order. This order is consistent, such that two queries for the
// same content (regardless of page size) yield annotations in the same order
// across their respective streams of paginated responses. Caller must have
// READ permission for the queried annotation sets.
SearchAnnotations(context.Context, *SearchAnnotationsRequest) (*SearchAnnotationsResponse, error)
}
// UnimplementedAnnotationServiceV1Server can be embedded to have forward compatible implementations.
type UnimplementedAnnotationServiceV1Server struct {
}
func (*UnimplementedAnnotationServiceV1Server) CreateAnnotationSet(context.Context, *CreateAnnotationSetRequest) (*AnnotationSet, error) {
return nil, status1.Errorf(codes.Unimplemented, "method CreateAnnotationSet not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) GetAnnotationSet(context.Context, *GetAnnotationSetRequest) (*AnnotationSet, error) {
return nil, status1.Errorf(codes.Unimplemented, "method GetAnnotationSet not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) UpdateAnnotationSet(context.Context, *UpdateAnnotationSetRequest) (*AnnotationSet, error) {
return nil, status1.Errorf(codes.Unimplemented, "method UpdateAnnotationSet not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) DeleteAnnotationSet(context.Context, *DeleteAnnotationSetRequest) (*empty.Empty, error) {
return nil, status1.Errorf(codes.Unimplemented, "method DeleteAnnotationSet not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) SearchAnnotationSets(context.Context, *SearchAnnotationSetsRequest) (*SearchAnnotationSetsResponse, error) {
return nil, status1.Errorf(codes.Unimplemented, "method SearchAnnotationSets not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) CreateAnnotation(context.Context, *CreateAnnotationRequest) (*Annotation, error) {
return nil, status1.Errorf(codes.Unimplemented, "method CreateAnnotation not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) BatchCreateAnnotations(context.Context, *BatchCreateAnnotationsRequest) (*BatchCreateAnnotationsResponse, error) {
return nil, status1.Errorf(codes.Unimplemented, "method BatchCreateAnnotations not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) GetAnnotation(context.Context, *GetAnnotationRequest) (*Annotation, error) {
return nil, status1.Errorf(codes.Unimplemented, "method GetAnnotation not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) UpdateAnnotation(context.Context, *UpdateAnnotationRequest) (*Annotation, error) {
return nil, status1.Errorf(codes.Unimplemented, "method UpdateAnnotation not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) DeleteAnnotation(context.Context, *DeleteAnnotationRequest) (*empty.Empty, error) {
return nil, status1.Errorf(codes.Unimplemented, "method DeleteAnnotation not implemented")
}
func (*UnimplementedAnnotationServiceV1Server) SearchAnnotations(context.Context, *SearchAnnotationsRequest) (*SearchAnnotationsResponse, error) {
return nil, status1.Errorf(codes.Unimplemented, "method SearchAnnotations not implemented")
}
func RegisterAnnotationServiceV1Server(s *grpc.Server, srv AnnotationServiceV1Server) {
s.RegisterService(&_AnnotationServiceV1_serviceDesc, srv)
}
func _AnnotationServiceV1_CreateAnnotationSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(CreateAnnotationSetRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).CreateAnnotationSet(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/CreateAnnotationSet",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).CreateAnnotationSet(ctx, req.(*CreateAnnotationSetRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_GetAnnotationSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(GetAnnotationSetRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).GetAnnotationSet(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/GetAnnotationSet",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).GetAnnotationSet(ctx, req.(*GetAnnotationSetRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_UpdateAnnotationSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(UpdateAnnotationSetRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).UpdateAnnotationSet(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/UpdateAnnotationSet",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).UpdateAnnotationSet(ctx, req.(*UpdateAnnotationSetRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_DeleteAnnotationSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(DeleteAnnotationSetRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).DeleteAnnotationSet(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/DeleteAnnotationSet",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).DeleteAnnotationSet(ctx, req.(*DeleteAnnotationSetRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_SearchAnnotationSets_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(SearchAnnotationSetsRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).SearchAnnotationSets(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/SearchAnnotationSets",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).SearchAnnotationSets(ctx, req.(*SearchAnnotationSetsRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_CreateAnnotation_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(CreateAnnotationRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).CreateAnnotation(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/CreateAnnotation",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).CreateAnnotation(ctx, req.(*CreateAnnotationRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_BatchCreateAnnotations_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(BatchCreateAnnotationsRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).BatchCreateAnnotations(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/BatchCreateAnnotations",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).BatchCreateAnnotations(ctx, req.(*BatchCreateAnnotationsRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_GetAnnotation_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(GetAnnotationRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).GetAnnotation(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/GetAnnotation",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).GetAnnotation(ctx, req.(*GetAnnotationRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_UpdateAnnotation_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(UpdateAnnotationRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).UpdateAnnotation(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/UpdateAnnotation",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).UpdateAnnotation(ctx, req.(*UpdateAnnotationRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_DeleteAnnotation_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(DeleteAnnotationRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).DeleteAnnotation(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/DeleteAnnotation",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).DeleteAnnotation(ctx, req.(*DeleteAnnotationRequest))
}
return interceptor(ctx, in, info, handler)
}
func _AnnotationServiceV1_SearchAnnotations_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
in := new(SearchAnnotationsRequest)
if err := dec(in); err != nil {
return nil, err
}
if interceptor == nil {
return srv.(AnnotationServiceV1Server).SearchAnnotations(ctx, in)
}
info := &grpc.UnaryServerInfo{
Server: srv,
FullMethod: "/google.genomics.v1.AnnotationServiceV1/SearchAnnotations",
}
handler := func(ctx context.Context, req interface{}) (interface{}, error) {
return srv.(AnnotationServiceV1Server).SearchAnnotations(ctx, req.(*SearchAnnotationsRequest))
}
return interceptor(ctx, in, info, handler)
}
var _AnnotationServiceV1_serviceDesc = grpc.ServiceDesc{
ServiceName: "google.genomics.v1.AnnotationServiceV1",
HandlerType: (*AnnotationServiceV1Server)(nil),
Methods: []grpc.MethodDesc{
{
MethodName: "CreateAnnotationSet",
Handler: _AnnotationServiceV1_CreateAnnotationSet_Handler,
},
{
MethodName: "GetAnnotationSet",
Handler: _AnnotationServiceV1_GetAnnotationSet_Handler,
},
{
MethodName: "UpdateAnnotationSet",
Handler: _AnnotationServiceV1_UpdateAnnotationSet_Handler,
},
{
MethodName: "DeleteAnnotationSet",
Handler: _AnnotationServiceV1_DeleteAnnotationSet_Handler,
},
{
MethodName: "SearchAnnotationSets",
Handler: _AnnotationServiceV1_SearchAnnotationSets_Handler,
},
{
MethodName: "CreateAnnotation",
Handler: _AnnotationServiceV1_CreateAnnotation_Handler,
},
{
MethodName: "BatchCreateAnnotations",
Handler: _AnnotationServiceV1_BatchCreateAnnotations_Handler,
},
{
MethodName: "GetAnnotation",
Handler: _AnnotationServiceV1_GetAnnotation_Handler,
},
{
MethodName: "UpdateAnnotation",
Handler: _AnnotationServiceV1_UpdateAnnotation_Handler,
},
{
MethodName: "DeleteAnnotation",
Handler: _AnnotationServiceV1_DeleteAnnotation_Handler,
},
{
MethodName: "SearchAnnotations",
Handler: _AnnotationServiceV1_SearchAnnotations_Handler,
},
},
Streams: []grpc.StreamDesc{},
Metadata: "google/genomics/v1/annotations.proto",
}