| LEVEL = ../../../ |
| |
| Source = Calignm1.c constants.c defs.c Falign.c fft.c fftFunctions.c Galign11.c\ |
| genalign11.c genGalign11.c Halignmm.c io.c Lalign11.c Lalignmm.c\ |
| mltaln9.c MSalign11.c MSalignmm.c mtxutl.c pairlocalalign.c\ |
| partQalignmm.c partSalignmm.c Qalignmm.c Ralignmm.c rna.c SAalignmm.c\ |
| Salignmm.c suboptalign11.c tddis.c |
| PROG = pairlocalalign |
| CPPFLAGS = -DLLVM |
| RUN_OPTIONS = -b 62 -g 0.100 -f 2.00 -h 0.100 -L |
| STDIN_FILENAME = $(PROJ_SRC_DIR)/pyruvate_decarboxylase.fasta |
| LDFLAGS = -lm |
| HASH_PROGRAM_OUTPUT = 1 |
| |
| ifeq ($(ARCH),XCore) |
| XCORE_TARGET_NEEDS_MEMORY := 256 |
| # XCore takes ~2 hours. |
| RUNTIMELIMIT:=10800 |
| endif |
| |
| ifeq ($(ARCH),Mips) |
| # Mips takes ~25 minutes. |
| RUNTIMELIMIT:=1500 |
| endif |
| |
| include $(LEVEL)/MultiSource/Makefile.multisrc |
| |
| clean:: |
| rm -f pre hat2 trace |
